RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 VAMP7P51809 220 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 ODF2LQ9ULJ1 636 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 PIN4Q9Y237 131 aaKnown RBP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 ZNF233A6NK53 670 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 H3BQF6 201 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 MFAP3LO75121 409 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 LAMTOR4Q0VGL1 99 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 FOXR1Q6PIV2 292 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 PASD1Q8IV76 773 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 MBOAT7Q96N66 472 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 FAM53CQ9NYF3 392 aa17.2■□□□□ 0.34
PDGFB-201ENST00000331163 RBAKQ9NYW8 714 aaPredicted RBP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 RRP15Q9Y3B9 282 aaKnown RBP17.2■□□□□ 0.34
PDGFB-201ENST00000331163 SNAI1O95863 264 aaPredicted RBP17.19■□□□□ 0.34
PDGFB-201ENST00000331163 TGFB3P10600 412 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 MAGEA1P43355 309 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 HSP90B2PQ58FF3 399 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 TRIM65Q6PJ69 517 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 GPATCH11Q8N954 259 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 ADPGKQ9BRR6 497 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 ANKEF1Q9NU02 776 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 ADAMTS5Q9UNA0 930 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 COL2A1P02458 1487 aaPredicted RBP17.19■□□□□ 0.34
PDGFB-201ENST00000331163 PDXKO00764 312 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 GTF2A1P52655 376 aaPredicted RBP17.19■□□□□ 0.34
PDGFB-201ENST00000331163 SPOPLQ6IQ16 392 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 CYP26C1Q6V0L0 522 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 FAM184BQ9ULE4 1060 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 GLRA2P23416 452 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 GFPT1Q06210 699 aaPredicted RBP17.19■□□□□ 0.34
PDGFB-201ENST00000331163 ZBTB41Q5SVQ8 909 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 OLFML2BQ68BL8 750 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 FAM117BQ6P1L5 589 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 VPS36Q86VN1 386 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 TC2NQ8N9U0 490 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 GOLGA1Q92805 767 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 FAM167AQ96KS9 214 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 XPNPEP1Q9NQW7 623 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 FLRT1Q9NZU1 646 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
PDGFB-201ENST00000331163 DOCK3Q8IZD9 2030 aa17.19■□□□□ 0.34
PDGFB-201ENST00000331163 SYNGAP1Q96PV0 1343 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 GUCY2FP51841 1108 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 KIF5AQ12840 1032 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 TFDP1Q14186 410 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 CDKAL1Q5VV42 579 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 TMEM130Q8N3G9 435 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 ATP8B4Q8TF62 1192 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 FRMPD4Q14CM0 1322 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 ARHGAP6O43182 974 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 ADCY3O60266 1144 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 HBP1O60381 514 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 SLC9C1Q4G0N8 1177 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 USP37Q86T82 979 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 REXO1L1PQ8IX06 675 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
PDGFB-201ENST00000331163 METTL14Q9HCE5 456 aaKnown RBP17.18■□□□□ 0.34
PDGFB-201ENST00000331163 ABHD10Q9NUJ1 306 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 DNAJC12Q9UKB3 198 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 HYOU1Q9Y4L1 999 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 RPTORQ8N122 1335 aa17.18■□□□□ 0.34
PDGFB-201ENST00000331163 ATP2A1O14983 1001 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 TGFB1I1O43294 461 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 GNA14O95837 355 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 ATP4AP20648 1035 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 GRIK4Q16099 956 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 PAN2Q504Q3 1202 aaKnown RBP17.17■□□□□ 0.34
PDGFB-201ENST00000331163 NIPA1Q7RTP0 329 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 GOLGA6L1Q8N7Z2 621 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 PLCB1Q9NQ66 1216 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 FAN1Q9Y2M0 1017 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 PHLPP2Q6ZVD8 1323 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 MRPS25P82663 173 aaKnown RBP17.17■□□□□ 0.34
PDGFB-201ENST00000331163 FSCN1Q16658 493 aaKnown RBP17.17■□□□□ 0.34
PDGFB-201ENST00000331163 KCNV1Q6PIU1 500 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 LIMA1Q9UHB6 759 aaKnown RBP17.17■□□□□ 0.34
PDGFB-201ENST00000331163 PIK3R2O00459 728 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 STAM2O75886 525 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 TNFAIP3P21580 790 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 CXCR5P32302 372 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 GPR161Q8N6U8 529 aaKnown RBP17.17■□□□□ 0.34
PDGFB-201ENST00000331163 SENP7Q9BQF6 1050 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 XPNPEP3Q9NQH7 507 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 SEL1LQ9UBV2 794 aa17.17■□□□□ 0.34
PDGFB-201ENST00000331163 PRRC2BQ5JSZ5 2229 aaKnown RBP17.16■□□□□ 0.34
PDGFB-201ENST00000331163 KIF3CO14782 793 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 STAT1P42224 750 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 AMHR2Q16671 573 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 ODF2Q5BJF6 829 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 RAD9BQ6WBX8 426 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 KAT5Q92993 513 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 GOLPH3Q9H4A6 298 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 SYNCQ9H7C4 482 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 ADGRA3Q8IWK6 1321 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 TTLL13PA6NNM8 815 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 TNFSF9P41273 254 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 ADAT2Q7Z6V5 191 aaKnown RBP17.16■□□□□ 0.34
PDGFB-201ENST00000331163 NHEJ1Q9H9Q4 299 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms