RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CCDC60Q8IWA6 550 aaPredicted RBP7.14□□□□□ -1.27
SMG1-201ENST00000330588 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMG1-201ENST00000330588 TBCKQ8TEA7 893 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 PPP1R13LQ8WUF5 828 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 RSPH1Q8WYR4 309 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 GTF3C6Q969F1 213 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 FAM20AQ96MK3 541 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 FAM161BQ96MY7 647 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 IFIH1Q9BYX4 1025 aaKnown RBP7.14□□□□□ -1.27
SMG1-201ENST00000330588 PRDM6Q9NQX0 595 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 TPCN1Q9ULQ1 816 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 RWDD3Q9Y3V2 267 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 TELO2Q9Y4R8 837 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 TRPV2Q9Y5S1 764 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 WDR81Q562E7 1941 aa7.14□□□□□ -1.27
SMG1-201ENST00000330588 ZBTB42B2RXF5 422 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 MSH4O15457 936 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 DKC1O60832 514 aaKnown RBP eCLIP7.13□□□□□ -1.274e-9■■■■■ 30.3
SMG1-201ENST00000330588 MARK3P27448 753 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 RABGGTBP53611 331 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 AK2P54819 239 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 DEFB103AP81534 67 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 LPIN1Q14693 890 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 TCTN1Q2MV58 587 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 MTHFD1LQ6UB35 978 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 RUFY4Q6ZNE9 571 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 LRRC69Q6ZNQ3 347 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 EXOC8Q8IYI6 725 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 LINC01465Q8N7H1 131 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 ETNPPLQ8TBG4 499 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 ATXN2LQ8WWM7 1075 aaKnown RBP7.13□□□□□ -1.27
SMG1-201ENST00000330588 TNFRSF25Q93038 417 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 TGS1Q96RS0 853 aaKnown RBP7.13□□□□□ -1.27
SMG1-201ENST00000330588 LLPHQ9BRT6 129 aaKnown RBP7.13□□□□□ -1.27
SMG1-201ENST00000330588 TEKT3Q9BXF9 490 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 CELF4Q9BZC1 486 aaKnown RBP7.13□□□□□ -1.27
SMG1-201ENST00000330588 PRDM12Q9H4Q4 367 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 BRMS1Q9HCU9 246 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 KCNMB3Q9NPA1 279 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 CDY2AQ9Y6F7 541 aa7.13□□□□□ -1.27
SMG1-201ENST00000330588 COL4A4P53420 1690 aaPredicted RBP7.13□□□□□ -1.27
SMG1-201ENST00000330588 MYH9P35579 1960 aaKnown RBP7.13□□□□□ -1.27
SMG1-201ENST00000330588 CCDC194A0A1B0GVG4 234 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 LINC01553A4QN01 128 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 C5orf67F2Z3F1 127 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 GAS7O60861 476 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 CTDNEP1O95476 244 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 C22orf31O95567 290 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 PPP2R5CQ13362 524 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 ORC2Q13416 577 aaPredicted RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 DOC2BQ14184 412 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 LRCH2Q5VUJ6 765 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 SWSAP1Q6NVH7 229 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 NEK8Q86SG6 692 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 SLFN12Q8IYM2 578 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 RASGRP4Q8TDF6 673 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 DNAJB3Q8WWF6 145 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 ZSCAN31Q96LW9 406 aaPredicted RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 RC3H2Q9HBD1 1191 aaKnown RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 SH2B1Q9NRF2 756 aaPredicted RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 DISC1Q9NRI5 854 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 C1orf112Q9NSG2 853 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 NRBP2Q9NSY0 501 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 ORC3Q9UBD5 711 aaPredicted RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 STARD13Q9Y3M8 1113 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 ADAMTS3O15072 1205 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 GAS2O43903 313 aaKnown RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 PRMT3O60678 531 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 BRD1O95696 1058 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 RB1P06400 928 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 CTSHP09668 335 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 STAG3L1P0CL83 205 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 MYOGP15173 224 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 ALAS2P22557 587 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 KLRC1P26715 233 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 TMOD1P28289 359 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 SCNN1AP37088 669 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 GATA4P43694 442 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 RBM25P49756 843 aaKnown RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 NEK4P51957 841 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 SFSWAPQ12872 951 aaKnown RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 STK3Q13188 491 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 ADGRE1Q14246 886 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 TARBP2Q15633 366 aaKnown RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 ME3Q16798 604 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 AAK1Q2M2I8 961 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 NAALADL2Q58DX5 795 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 XKR3Q5GH77 459 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 SH3PXD2AQ5TCZ1 1133 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 NPAS4Q8IUM7 802 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 KIAA0319LQ8IZA0 1049 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 NSUN7Q8NE18 718 aaKnown RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 ZNF689Q96CS4 500 aaPredicted RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 SLC30A3Q99726 388 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 JPH2Q9BR39 696 aaPredicted RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 LMAN2LQ9H0V9 348 aa7.12□□□□□ -1.27
SMG1-201ENST00000330588 ELAC1Q9H777 363 aaKnown RBP7.12□□□□□ -1.27
SMG1-201ENST00000330588 COG5Q9UP83 839 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms