RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SEL1LQ9UBV2 794 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 COL4A3BPQ9Y5P4 624 aa18.07■□□□□ 0.48
PDLIM1-201ENST00000329399 LRRC10BA6NIK2 292 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 DARSP14868 501 aaKnown RBP18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 EIF4BP23588 611 aaKnown RBP18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 POLGP54098 1239 aaPredicted RBP18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 HTRA4P83105 476 aaPredicted RBP18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 LRRC63Q05C16 580 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 ADGRE1Q14246 886 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 DSC3Q14574 896 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 EMC2Q15006 297 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 KLHL10Q6JEL2 608 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 ZSCAN30Q86W11 494 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 NLRP7Q8WX94 980 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 TSPYL2Q9H2G4 693 aaPredicted RBP18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 MINDY3Q9H8M7 445 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 IFT122Q9HBG6 1241 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 ODF2LQ9ULJ1 636 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 CTNND2Q9UQB3 1225 aa18.06■□□□□ 0.48
PDLIM1-201ENST00000329399 SSBP05455 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 SRGAP2CP0DJJ0 459 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 PRKCSHP14314 528 aaPredicted RBP18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 IDEP14735 1019 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 IBSPP21815 317 aaPredicted RBP18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 EEF1GP26641 437 aaKnown RBP18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 GATMP50440 423 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 LAMTOR4Q0VGL1 99 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 PPP2R2DQ66LE6 453 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 MAEAQ7L5Y9 396 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 DYMQ7RTS9 669 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 ASAP3Q8TDY4 903 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 SLC7A3Q8WY07 619 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 P2RX5Q93086 422 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 ADAM2Q99965 735 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 GPRC5CQ9NQ84 441 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 GDAQ9Y2T3 454 aa18.05■□□□□ 0.48
PDLIM1-201ENST00000329399 TMEM265A0A087WTH1 108 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 LINC01553A4QN01 128 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 RFC5P40937 340 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 DNM2P50570 870 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 STK4Q13043 487 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 COASYQ13057 564 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 FAM26FQ5R3K3 315 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 CENPPQ6IPU0 288 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 NLRP4Q96MN2 994 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 TSG101Q99816 390 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 IFNKQ9P0W0 207 aa18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 PRRC2BQ5JSZ5 2229 aaKnown RBP18.04■□□□□ 0.48
PDLIM1-201ENST00000329399 USO1O60763 962 aaKnown RBP18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 GUCY2CP25092 1073 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 GIT2Q14161 759 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 ARSHQ5FYA8 562 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 STXBP4Q6ZWJ1 553 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 SMYD4Q8IYR2 804 aaPredicted RBP18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 MED15Q96RN5 788 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 XPO4Q9C0E2 1151 aaKnown RBP18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 BHMT2Q9H2M3 363 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 RC3H2Q9HBD1 1191 aaKnown RBP18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 OLFML3Q9NRN5 406 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 LIMA1Q9UHB6 759 aaKnown RBP18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 MYO7AQ13402 2215 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 COL4A6Q14031 1691 aa18.03■□□□□ 0.48
PDLIM1-201ENST00000329399 C9IYK1 514 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 GPR182O15218 404 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 TBCAO75347 108 aaKnown RBP18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 TPM2P07951 284 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 LINC00271P0C7V0 271 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 ARL2P36404 184 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 HERC4Q5GLZ8 1057 aaPredicted RBP18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 RINT1Q6NUQ1 792 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 TTI2Q6NXR4 508 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 SLC17A8Q8NDX2 589 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 SP7Q8TDD2 431 aaPredicted RBP18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 SCLT1Q96NL6 688 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 RGS18Q9NS28 235 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 MAGEC2Q9UBF1 373 aaPredicted RBP18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 KCNG1Q9UIX4 513 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 MTUS1Q9ULD2 1270 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 ZKSCAN5Q9Y2L8 839 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 PPME1Q9Y570 386 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 INSL6Q9Y581 213 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 ARID2Q68CP9 1835 aa18.02■□□□□ 0.48
PDLIM1-201ENST00000329399 A0A1B0GTH6 734 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 ARHGEF35A5YM69 484 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 NRDCO43847 1150 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 GLRA2P23416 452 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 MSNP26038 577 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 FAM189BP81408 668 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 C1orf186Q6ZWK4 172 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 KIAA0895Q8NCT3 520 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 PSPC1Q8WXF1 523 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 ARNTL2Q8WYA1 636 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 ZNF689Q96CS4 500 aaPredicted RBP18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 JPH2Q9BR39 696 aaPredicted RBP18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 C17orf80Q9BSJ5 609 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 FTHL17Q9BXU8 183 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 GCOM2Q9BZD3 368 aaPredicted RBP18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 UBE4BO95155 1302 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 ESPNB1AK53 854 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms