RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 SLITRK3O94933 977 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 CTDNEP1O95476 244 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 HOXA11P31270 313 aaPredicted RBP25.92■■□□□ 1.74
TMEM54-201ENST00000329151 TXKP42681 527 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 PTENP60484 403 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 SAFBQ15424 915 aaKnown RBP eCLIP25.92■■□□□ 1.74
TMEM54-201ENST00000329151 EARS2Q5JPH6 523 aaKnown RBP25.92■■□□□ 1.74
TMEM54-201ENST00000329151 UBXN11Q5T124 520 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 IER5LQ5T953 404 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 CCDC149Q6ZUS6 474 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 SLC22A17Q8WUG5 538 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 ASIC4Q96FT7 647 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 MFSD1Q9H3U5 465 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 IPPQ9Y573 584 aa25.92■■□□□ 1.74
TMEM54-201ENST00000329151 ZBTB39O15060 712 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 TSPAN1O60635 241 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 ADH1AP07327 375 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 SPIRE1Q08AE8 756 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 OTOP3Q7RTS5 596 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 DIS3L2Q8IYB7 885 aaKnown RBP25.91■■□□□ 1.74
TMEM54-201ENST00000329151 CPB2Q96IY4 423 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 KLHL5Q96PQ7 755 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 CSRNP2Q9H175 543 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 PPP4R2Q9NY27 417 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 USTQ9Y2C2 406 aa25.91■■□□□ 1.74
TMEM54-201ENST00000329151 SOD2P04179 222 aa25.9■■□□□ 1.74
TMEM54-201ENST00000329151 AVPR2P30518 371 aa25.9■■□□□ 1.74
TMEM54-201ENST00000329151 MLH1P40692 756 aa25.9■■□□□ 1.74
TMEM54-201ENST00000329151 ZDHHC14Q8IZN3 488 aa25.9■■□□□ 1.74
TMEM54-201ENST00000329151 GAD1Q99259 594 aa25.9■■□□□ 1.74
TMEM54-201ENST00000329151 LIMD1Q9UGP4 676 aa25.9■■□□□ 1.74
TMEM54-201ENST00000329151 CACNA1HO95180 2353 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 ARL5CA6NH57 179 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 LYPLA2O95372 231 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 CNPP09543 421 aaKnown RBP25.89■■□□□ 1.74
TMEM54-201ENST00000329151 VCPP55072 806 aaKnown RBP25.89■■□□□ 1.74
TMEM54-201ENST00000329151 POU5F1BQ06416 359 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 ME3Q16798 604 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 TMEM132AQ24JP5 1023 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 KANK3Q6NY19 840 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 SMG8Q8ND04 991 aaKnown RBP25.89■■□□□ 1.74
TMEM54-201ENST00000329151 COLEC11Q9BWP8 271 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 VN1R3Q9BXE9 311 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 EIF2AQ9BY44 585 aaKnown RBP25.89■■□□□ 1.74
TMEM54-201ENST00000329151 XPNPEP1Q9NQW7 623 aa25.89■■□□□ 1.74
TMEM54-201ENST00000329151 BTBD18B2RXH4 712 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 B4GALT3O60512 393 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 BRD1O95696 1058 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 ASGR2P07307 311 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 FDPSP14324 419 aaKnown RBP25.88■■□□□ 1.73
TMEM54-201ENST00000329151 ATP2B1P20020 1258 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 GLUD2P49448 558 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 CLCN4P51793 760 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 AFF1P51825 1210 aaKnown RBP25.88■■□□□ 1.73
TMEM54-201ENST00000329151 NEK4P51957 841 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 GPR149Q86SP6 731 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 RPS6KC1Q96S38 1066 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 HERC2P3Q9BVR0 1158 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 POLR3FQ9H1D9 316 aaPredicted RBP25.88■■□□□ 1.73
TMEM54-201ENST00000329151 GIT1Q9Y2X7 761 aa25.88■■□□□ 1.73
TMEM54-201ENST00000329151 LRRIQ4A6NIV6 560 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 USO1O60763 962 aaKnown RBP25.87■■□□□ 1.73
TMEM54-201ENST00000329151 SCNN1GP51170 649 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 NUBP1P53384 320 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 MBTD1Q05BQ5 628 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 CAPSQ13938 189 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 ASAP3Q8TDY4 903 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 PIGOQ8TEQ8 1089 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 ATOH1Q92858 354 aaPredicted RBP25.87■■□□□ 1.73
TMEM54-201ENST00000329151 TNFRSF25Q93038 417 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 HSD17B14Q9BPX1 270 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 HES2Q9Y543 173 aa25.87■■□□□ 1.73
TMEM54-201ENST00000329151 C2orf16Q68DN1 1984 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 DENND4AQ7Z401 1863 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 GLUD1P00367 558 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 SLC27A1Q6PCB7 646 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 IFNLR1Q8IU57 520 aaPredicted RBP25.86■■□□□ 1.73
TMEM54-201ENST00000329151 ZBTB8OSQ8IWT0 167 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 COLGALT2Q8IYK4 626 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 NSUN7Q8NE18 718 aaKnown RBP25.86■■□□□ 1.73
TMEM54-201ENST00000329151 ERMNQ8TAM6 284 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 MAN1C1Q9NR34 630 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 PARP2Q9UGN5 583 aa25.86■■□□□ 1.73
TMEM54-201ENST00000329151 NPTXRO95502 500 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 PDGFBP01127 241 aaPredicted RBP25.85■■□□□ 1.73
TMEM54-201ENST00000329151 ARF4P18085 180 aaPredicted RBP25.85■■□□□ 1.73
TMEM54-201ENST00000329151 RARRES1P49788 294 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 GNL2Q13823 731 aaKnown RBP25.85■■□□□ 1.73
TMEM54-201ENST00000329151 C15orf39Q6ZRI6 1047 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 MAEAQ7L5Y9 396 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 MCPH1Q8NEM0 835 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 STAMQ92783 540 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 ZFP42Q96MM3 310 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 NFKBIZQ9BYH8 718 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 RNF39Q9H2S5 420 aa25.85■■□□□ 1.73
TMEM54-201ENST00000329151 LARGE1O95461 756 aa25.84■■□□□ 1.73
TMEM54-201ENST00000329151 XRCC6P12956 609 aaKnown RBP eCLIP25.84■■□□□ 1.73
TMEM54-201ENST00000329151 GLRA2P23416 452 aa25.84■■□□□ 1.73
TMEM54-201ENST00000329151 MCM7P33993 719 aa25.84■■□□□ 1.73
TMEM54-201ENST00000329151 ARL2P36404 184 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms