RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LMBRD2Q68DH5 695 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-201ENST00000328923 C3orf62Q6ZUJ4 267 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 PPFIBP2Q8ND30 876 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 TNFRSF25Q93038 417 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 BHMTQ93088 406 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 CEP295NLQ96MC4 621 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 BLZF1Q9H2G9 400 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 DDX43Q9NXZ2 648 aaKnown RBP12.68□□□□□ -0.38
SHMT2-201ENST00000328923 KLHL14Q9P2G3 628 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 PRELID1Q9Y255 219 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 FADS3Q9Y5Q0 445 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 ZNF532Q9HCE3 1301 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 NHSQ6T4R5 1651 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 SBF2Q86WG5 1849 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 FBP2O00757 339 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 OPHN1O60890 802 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 RNASEH1O60930 286 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 ENDOUP21128 410 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 RELAQ04206 551 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 PDCD4Q53EL6 469 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 TTC38Q5R3I4 469 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 MFSD6Q6ZSS7 791 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 ZNF654Q8IZM8 581 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 NAPBQ9H115 298 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 IL1RAPL1Q9NZN1 696 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 SEC63Q9UGP8 760 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 TMA7Q9Y2S6 64 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 RREB1Q92766 1687 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 ARAP2Q8WZ64 1704 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 SOGA3Q5TF21 947 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 RNF43Q68DV7 783 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 DSTYKQ6XUX3 929 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 CAPN12Q6ZSI9 719 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 IFNL3Q8IZI9 196 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 TTLL11Q8NHH1 800 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 GDAP1Q8TB36 358 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 PGM2Q96G03 612 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 NOX5Q96PH1 765 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 PPP1R10Q96QC0 940 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 ERGIC2Q96RQ1 377 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 NDEL1Q9GZM8 345 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 EPB41L4BQ9H329 900 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 RETREG1Q9H6L5 497 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 ARHGAP20Q9P2F6 1191 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
SHMT2-201ENST00000328923 BCORQ6W2J9 1755 aa12.67□□□□□ -0.38
SHMT2-201ENST00000328923 TRIM49BA6NDI0 452 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-201ENST00000328923 PSMA7O14818 248 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 PJA2O43164 708 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 ADAM23O75077 832 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 PALMO75781 387 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 GTF2H1P32780 548 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 EIF4A3P38919 411 aaKnown RBP12.66□□□□□ -0.38
SHMT2-201ENST00000328923 RGS2P41220 211 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 CTSWP56202 376 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 ITPK1Q13572 414 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 C4orf50Q6ZRC1 276 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 ZNF34Q8IZ26 560 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 RIN3Q8TB24 985 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 INPP5DQ92835 1189 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 PCMTD1Q96MG8 357 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-201ENST00000328923 SH3GL1Q99961 368 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 AP1M1Q9BXS5 423 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 NACAP1Q9BZK3 213 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 TMEM59LQ9UK28 342 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 GDAQ9Y2T3 454 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 SUGT1Q9Y2Z0 365 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 BTBD19C9JJ37 291 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 KCNQ2O43526 872 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 TPPPO94811 219 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 CBX6O95503 412 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 ITGA6P23229 1130 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 SLCO1A2P46721 670 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 KCNMA1Q12791 1236 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 FOXD4Q12950 439 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-201ENST00000328923 KCTD21Q4G0X4 260 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 ACSBG2Q5FVE4 666 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 ARL6IP4Q66PJ3 421 aaKnown RBP12.66□□□□□ -0.38
SHMT2-201ENST00000328923 B3GNT6Q6ZMB0 384 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-201ENST00000328923 CCDC127Q96BQ5 260 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 HEPHQ9BQS7 1158 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 DDX47Q9H0S4 455 aaKnown RBP12.66□□□□□ -0.38
SHMT2-201ENST00000328923 GREM2Q9H772 168 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
SHMT2-201ENST00000328923 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms