RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 UBE2SQ16763 222 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 LONRF1Q17RB8 773 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 WASHC2DQ5SRD0 308 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 SEL1L2Q5TEA6 688 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ANO7Q6IWH7 933 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 PPP1R21Q6ZMI0 780 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 RGS9BPQ6ZS82 235 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 MIGA2Q7L4E1 593 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 TXNRD3Q86VQ6 643 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 SLC13A5Q86YT5 568 aaPredicted RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 MAPKAPK5Q8IW41 473 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 MFN1Q8IWA4 741 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.09□□□□□ -0.47
GINS3-202ENST00000328514 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 PIGOQ8TEQ8 1089 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 STK32AQ8WU08 396 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ZFAND2BQ8WV99 257 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 KRT35Q92764 455 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 CCDC113Q9H0I3 377 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ETNK1Q9HBU6 452 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ETAA1Q9NY74 926 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 MTMR4Q9NYA4 1195 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 APEX2Q9UBZ4 518 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 DNM3Q9UQ16 869 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 STARD13Q9Y3M8 1113 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 DOT1LQ8TEK3 1739 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 GPR75-ASB3A0A0A6YYF3 556 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ANKRD63C9JTQ0 380 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 TTC4O95801 387 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ACADSP16219 412 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 GAP43P17677 238 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ITIH2P19823 946 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 RFC4P35249 363 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 SLC18A1P54219 525 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 CAV1Q03135 178 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 SF3A3Q12874 501 aaKnown RBP eCLIP12.09□□□□□ -0.47
GINS3-202ENST00000328514 STRN3Q13033 797 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 CALCOCO2Q13137 446 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 BIRC2Q13490 618 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 SLC30A9Q6PML9 568 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 SYDE1Q6ZW31 735 aaPredicted RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 CATSPER3Q86XQ3 398 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 RELL1Q8IUW5 271 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ERMNQ8TAM6 284 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 CRYGNQ8WXF5 182 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 GJA10Q969M2 543 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 CRAMP1Q96RY5 1269 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ARHGEF10LQ9HCE6 1279 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 TAS2R14Q9NYV8 317 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 TRIM33Q9UPN9 1127 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ASB3Q9Y575 518 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 ECEL1O95672 775 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 SPATA31C1P0DKV0 1188 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 BRAFP15056 766 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 CREB1P16220 341 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 TAC1P20366 129 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 CNGA1P29973 690 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 PEX19P40855 299 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.48
GINS3-202ENST00000328514 SIK1P57059 783 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 ZNF543Q08ER8 600 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 ITPK1Q13572 414 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 AADACL2Q6P093 401 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 LMNTD2Q8IXW0 634 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 CCDC105Q8IYK2 499 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 FAM186BQ8IYM0 893 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 UHMK1Q8TAS1 419 aaKnown RBP12.08□□□□□ -0.48
GINS3-202ENST00000328514 ETNPPLQ8TBG4 499 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 ASAP3Q8TDY4 903 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 AGPAT1Q99943 283 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 ZHX3Q9H4I2 956 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 PSTPIP2Q9H939 334 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 EURLQ9NYK6 297 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
GINS3-202ENST00000328514 PPP1R1BQ9UD71 204 aaPredicted RBP12.08□□□□□ -0.48
GINS3-202ENST00000328514 SAP30BPQ9UHR5 308 aaKnown RBP12.08□□□□□ -0.48
GINS3-202ENST00000328514 UBE4BO95155 1302 aa12.08□□□□□ -0.48
GINS3-202ENST00000328514 ZMYM2Q9UBW7 1377 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 DPPA5A6NC42 116 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 BRD2P25440 801 aaKnown RBP12.07□□□□□ -0.48
GINS3-202ENST00000328514 CDC25CP30307 473 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 STX2P32856 288 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 MARCKSL1P49006 195 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
GINS3-202ENST00000328514 GPC5P78333 572 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 ROR2Q01974 943 aaKnown RBP12.07□□□□□ -0.48
GINS3-202ENST00000328514 PALB2Q86YC2 1186 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 MGARPQ8TDB4 240 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 PARD3BQ8TEW8 1205 aa12.07□□□□□ -0.48
GINS3-202ENST00000328514 DDX23Q9BUQ8 820 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms