RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
SCAP-202ENST00000320017 A6NJR5 290 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 NUDT17P0C025 328 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 CCNB1P14635 433 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 CBX3Q13185 183 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 LRRC74BQ6ZQY2 392 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 VPS52Q8N1B4 723 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 ARHGAP18Q8N392 663 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 ATP8B4Q8TF62 1192 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 IWS1Q96ST2 819 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 TRIM9Q9C026 710 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 LRMDAQ9H2I8 198 aa16.06■□□□□ 0.16
SCAP-202ENST00000320017 PAIP2BQ9ULR5 123 aaKnown RBP16.06■□□□□ 0.16
SCAP-202ENST00000320017 MARK3P27448 753 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 RTP1P59025 263 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 CDR2Q01850 454 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 PABPC1LQ4VXU2 614 aaKnown RBP16.05■□□□□ 0.16
SCAP-202ENST00000320017 KIAA1755Q5JYT7 1200 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 ALKBH5Q6P6C2 394 aaKnown RBP16.05■□□□□ 0.16
SCAP-202ENST00000320017 JAMLQ86YT9 394 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 RIBC1Q8N443 379 aaPredicted RBP16.05■□□□□ 0.16
SCAP-202ENST00000320017 TSG101Q99816 390 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 SPATA16Q9BXB7 569 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 FAM192AQ9GZU8 254 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 TRMT1LQ7Z2T5 733 aaKnown RBP16.05■□□□□ 0.16
SCAP-202ENST00000320017 MAP7D3Q8IWC1 876 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 CEP70Q8NHQ1 597 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 FAM136AQ96C01 138 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 NUDT12Q9BQG2 462 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 TMEM47Q9BQJ4 181 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 TIPINQ9BVW5 301 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 EPB41L4BQ9H329 900 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 CEP72Q9P209 647 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 LARSQ9P2J5 1176 aaKnown RBP16.05■□□□□ 0.16
SCAP-202ENST00000320017 AMFRQ9UKV5 643 aa16.05■□□□□ 0.16
SCAP-202ENST00000320017 MAPK13O15264 365 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 UBE2SQ16763 222 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 DSTYKQ6XUX3 929 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 C4orf32Q8N8J7 132 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 MPP4Q96JB8 637 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 NUP98P52948 1817 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 MYH1P12882 1939 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 TAF1P21675 1872 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 TDP2O95551 362 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 NEK3P51956 506 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 KPNB1Q14974 876 aaKnown RBP16.04■□□□□ 0.16
SCAP-202ENST00000320017 EXOC3L4Q17RC7 722 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 PARP6Q2NL67 630 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 ISLR2Q6UXK2 745 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 KIAA0895Q8NCT3 520 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 U2AF1L4Q8WU68 220 aaKnown RBP16.04■□□□□ 0.16
SCAP-202ENST00000320017 CCDC134Q9H6E4 229 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 ZNF510Q9Y2H8 683 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
SCAP-202ENST00000320017 SLC16A2P36021 539 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 DNAJC14Q6Y2X3 702 aaPredicted RBP16.04■□□□□ 0.16
SCAP-202ENST00000320017 FBXO33Q7Z6M2 555 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 SPATA24Q86W54 205 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
SCAP-202ENST00000320017 SMC1BQ8NDV3 1235 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 IFT43Q96FT9 208 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 CLIC5Q9NZA1 410 aa16.04■□□□□ 0.16
SCAP-202ENST00000320017 ATP5HO75947 161 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 LYNP07948 512 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 TM4SF1P30408 202 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 PTK2Q05397 1052 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 WASHC2DQ5SRD0 308 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 SPTY2D1Q68D10 685 aaPredicted RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 CROCCP2Q86T23 111 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 SPOCK2Q92563 424 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 MRRFQ96E11 262 aaKnown RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 ZC3H12CQ9C0D7 883 aaKnown RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 NUP188Q5SRE5 1749 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 OR52Z1P0C646 297 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 EIF4BP23588 611 aaKnown RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 POLGP54098 1239 aaPredicted RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 EAPPQ56P03 285 aaPredicted RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 ANKLE1Q8NAG6 615 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 CKAP2Q8WWK9 683 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 TUBGCP5Q96RT8 1024 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 TMOD4Q9NZQ9 345 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 COL1A1P02452 1464 aaPredicted RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 SKIV2L2P42285 1042 aaKnown RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 PPP2R5BQ15173 497 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 TPCN2Q8NHX9 752 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 DDX18Q9NVP1 670 aaKnown RBP16.03■□□□□ 0.16
SCAP-202ENST00000320017 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
SCAP-202ENST00000320017 PASKQ96RG2 1323 aa16.02■□□□□ 0.16
SCAP-202ENST00000320017 SPAG7O75391 227 aa16.02■□□□□ 0.16
SCAP-202ENST00000320017 GFPT2O94808 682 aa16.02■□□□□ 0.16
SCAP-202ENST00000320017 H2AFZP0C0S5 128 aa16.02■□□□□ 0.16
SCAP-202ENST00000320017 ACTN1P12814 892 aa16.02■□□□□ 0.16
SCAP-202ENST00000320017 LRRC36Q1X8D7 754 aa16.02■□□□□ 0.16
SCAP-202ENST00000320017 LIN52Q52LA3 116 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms