RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 FBXO38Q6PIJ6 1188 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 ELMO3Q96BJ8 720 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 STK33Q9BYT3 514 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 EPB41L5Q9HCM4 733 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 ANAPC7Q9UJX3 599 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 PLAGL2Q9UPG8 496 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 INPP5FQ9Y2H2 1132 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 UBIAD1Q9Y5Z9 338 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 GAS8O95995 478 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 KCNJ6P48051 423 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 ERVK-9P63128 1117 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 ITGB3BPQ13352 177 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 ZNF211Q13398 564 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 LAMC2Q13753 1193 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 METTL7BQ6UX53 244 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 TRIM59Q8IWR1 403 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 REXO1L1PQ8IX06 675 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 SLC30A5Q8TAD4 765 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 HSD17B14Q9BPX1 270 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 PAIP2Q9BPZ3 127 aaKnown RBP9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 SELENOSQ9BQE4 189 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 CCDC77Q9BR77 488 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 GCOM2Q9BZD3 368 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 SNX25Q9H3E2 840 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 GOLPH3Q9H4A6 298 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 ZFYVE28Q9HCC9 887 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 CHORDC1Q9UHD1 332 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 DUSP10Q9Y6W6 482 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 MYH3P11055 1940 aa9.99□□□□□ -0.81
TMEM39A-201ENST00000319172 CAPN9O14815 690 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 MUTP22033 750 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 ADORA2AP29274 412 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 NLRP11P59045 1033 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 IER5Q5VY09 327 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 MFSD14CQ5VZR4 134 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 TRIM65Q6PJ69 517 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 C1orf186Q6ZWK4 172 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 PLEKHH3Q7Z736 793 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 DNAAF5Q86Y56 855 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 SPATA20Q8TB22 786 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 COPS5Q92905 334 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 IKZF4Q9H2S9 585 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 CAPN2P17655 700 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 PON1P27169 355 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 GCLCP48506 637 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 TNFAIP2Q03169 654 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 OR6B2Q6IFH4 312 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 NIPA1Q7RTP0 329 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 FGFBP2Q9BYJ0 223 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 TOPORSQ9NS56 1045 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 IRS2Q9Y4H2 1338 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 MYH13Q9UKX3 1938 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 SSU72P8A0A1W2PR75 194 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 ZNF185O15231 689 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 FGGP02679 453 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 KCNA3P22001 575 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 UBA1P22314 1058 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 GNA15P30679 374 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 GPC5P78333 572 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 HADHQ16836 314 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 GNASQ5JWF2 1037 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 GJC2Q5T442 439 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 ERICH1Q86X53 443 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 PPP1R13LQ8WUF5 828 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 KIF12Q96FN5 646 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 WNK4Q96J92 1243 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 FAM193BQ96PV7 902 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 RABEP2Q9H5N1 569 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 PIN4Q9Y237 131 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 FRMPD4Q14CM0 1322 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 A0A087X0T9 212 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 HLA-DRAP01903 254 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 FAM228BP0C875 321 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 ZNF286BP0CG31 522 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 GNAT1P11488 350 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 CLCN6P51797 869 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 GALCP54803 685 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 PPIL2Q13356 520 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 NCOA4Q13772 614 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 ARMCX2Q7L311 632 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 RHOT2Q8IXI1 618 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 ATRIPQ8WXE1 791 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 LRRC45Q96CN5 670 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 AGPAT1Q99943 283 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 RAB17Q9H0T7 212 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 VAV3Q9UKW4 847 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 ZNF148Q9UQR1 794 aa9.98□□□□□ -0.81
TMEM39A-201ENST00000319172 CYP2C9P11712 490 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 KLRC1P26715 233 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 OAS2P29728 719 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 DYNLT1P63172 113 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 MRPS9P82933 396 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 KRT81Q14533 505 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 ARSHQ5FYA8 562 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 ATF7IP2Q5U623 682 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 RIOX2Q8IUF8 465 aa9.97□□□□□ -0.81
TMEM39A-201ENST00000319172 ZNF507Q8TCN5 953 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms