RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GIT2Q14161 759 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 RBM26Q5T8P6 1007 aaKnown RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 SEL1L2Q5TEA6 688 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ARMC3Q5W041 872 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ANO7Q6IWH7 933 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 NSMFQ6X4W1 530 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 KCTD1Q719H9 257 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ASRGL1Q7L266 308 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CATSPER3Q86XQ3 398 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 SLC30A5Q8TAD4 765 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 TTC8Q8TAM2 541 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ATG4AQ8WYN0 398 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 NUDCD1Q96RS6 583 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 FAM118BQ9BPY3 351 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 PITPNM3Q9BZ71 974 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 TAOK3Q9H2K8 898 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 BHMT2Q9H2M3 363 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ANKIB1Q9P2G1 1089 aa10.37□□□□□ -0.75
PTPRA-202ENST00000318266 CNOT7Q9UIV1 285 aaKnown RBP10.37□□□□□ -0.75
PTPRA-202ENST00000318266 ASTN1O14525 1302 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 KDM3AQ9Y4C1 1321 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SPOPO43791 374 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SNUPNO95149 360 aaKnown RBP10.36□□□□□ -0.75
PTPRA-202ENST00000318266 UNC5CO95185 931 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 FTLP02792 175 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-202ENST00000318266 BRD2P25440 801 aaKnown RBP10.36□□□□□ -0.75
PTPRA-202ENST00000318266 EPHB2P29323 1055 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SLC12A3P55017 1021 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 NPEPPSP55786 919 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 PICALMQ13492 652 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 CBWD6Q4V339 395 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 PRR16Q569H4 304 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 CBWD3Q5JTY5 395 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SPDYCQ5MJ68 293 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 CBWD5Q5RIA9 395 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SLC30A9Q6PML9 568 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 PPP4R3CPQ6ZMV5 832 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 FAM186BQ8IYM0 893 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 UBL4BQ8N7F7 174 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 OLIG1Q8TAK6 271 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SLCO1B3Q9NPD5 702 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 GJB6O95452 261 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 CBX6O95503 412 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SLURP2P0DP57 97 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 NMT1P30419 496 aaKnown RBP10.36□□□□□ -0.75
PTPRA-202ENST00000318266 GBP1P32455 592 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 BTDP43251 543 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 RRP1BQ14684 758 aaKnown RBP10.36□□□□□ -0.75
PTPRA-202ENST00000318266 CAPN12Q6ZSI9 719 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 CNBD1Q8NA66 436 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SUPT20HQ8NEM7 779 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 NEDD1Q8NHV4 660 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 CKAP2Q8WWK9 683 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 RPS6KC1Q96S38 1066 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 MXD3Q9BW11 206 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 SYNGAP1Q96PV0 1343 aa10.36□□□□□ -0.75
PTPRA-202ENST00000318266 ESYT2A0FGR8 921 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L10C9JJH3 530 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 FOXN3O00409 490 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PODXLO00592 558 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 THAP12O43422 761 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 TBCAO75347 108 aaKnown RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 CETPP11597 493 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 NEFHP12036 1026 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 FOXN2P32314 431 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ERFP50548 548 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PPP2R5EQ16537 467 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 HP1BP3Q5SSJ5 553 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 KIAA0825Q8IV33 1275 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ADGRF4Q8IZF3 695 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PIGOQ8TEQ8 1089 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 SYT15Q9BQS2 421 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 RIOX1Q9H6W3 641 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PAPOLBQ9NRJ5 636 aaKnown RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 NKIRAS1Q9NYS0 192 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PARP2Q9UGN5 583 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 INTUQ9ULD6 942 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 TRAF3IP3Q9Y228 551 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ZNF831Q5JPB2 1677 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 PASKQ96RG2 1323 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 LRRD1A4D1F6 860 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 A6NHS1 94 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 CLDN3O15551 220 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 HSPA6P17066 643 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 TAL1P17542 331 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 RPL13P26373 211 aaKnown RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 COILP38432 576 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-202ENST00000318266 SNAP25P60880 206 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 TMEM154Q6P9G4 183 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 FOXR2Q6PJQ5 311 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 C9orf72Q96LT7 481 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ZSWIM1Q9BR11 485 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 KIAA1683Q9H0B3 1180 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 JMJD4Q9H9V9 463 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 RNPEPL1Q9HAU8 725 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
PTPRA-202ENST00000318266 DLGAP2Q9P1A6 1054 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms