RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CDK17Q00537 523 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 RAD51Q06609 339 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 BAG5Q9UL15 447 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 LRG1P02750 347 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 RWDD2BP57060 319 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 ANO4Q32M45 955 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 SZRD1Q7Z422 152 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 CCDC170Q8IYT3 715 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 ATP2C1P98194 919 aaPredicted RBP14.39□□□□□ -0.11
RFFL-201ENST00000315249 CDR2LQ86X02 465 aaPredicted RBP14.39□□□□□ -0.11
RFFL-201ENST00000315249 ZRANB2O95218 330 aaKnown RBP eCLIP14.38□□□□□ -0.116e-6■■■■□ 21
RFFL-201ENST00000315249 KRT3P12035 628 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 INTS2Q9H0H0 1204 aaKnown RBP14.38□□□□□ -0.11
RFFL-201ENST00000315249 SLC38A7Q9NVC3 462 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 NDUFA10O95299 355 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 FOXD4Q12950 439 aaPredicted RBP14.38□□□□□ -0.11
RFFL-201ENST00000315249 STAG3L1P0CL83 205 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 TMED2Q15363 201 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 KDELC2Q7Z4H8 507 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 TADA2BQ86TJ2 420 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 FBXL13Q8NEE6 735 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 BHMTQ93088 406 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 PPP1R12CQ9BZL4 782 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 WNT10BO00744 389 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 GPC5P78333 572 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 SLMAPQ14BN4 828 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 PCSK9Q8NBP7 692 aaKnown RBP14.38□□□□□ -0.11
RFFL-201ENST00000315249 PPP1R13BQ96KQ4 1090 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 PPP2R3BQ9Y5P8 575 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 CD4P01730 458 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 ASPHQ12797 758 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 DRP2Q13474 957 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 LRRC8CQ8TDW0 803 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 CABS1Q96KC9 395 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 NUP85Q9BW27 656 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 GINM1Q9NU53 330 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 HSPBP1Q9NZL4 362 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 DOLKQ9UPQ8 538 aa14.38□□□□□ -0.11
RFFL-201ENST00000315249 MAFGO15525 162 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 ASAP2O43150 1006 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 ACTR2P61160 394 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 RHOT2Q8IXI1 618 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 TTC39CQ8N584 583 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 RNF25Q96BH1 459 aaPredicted RBP14.37□□□□□ -0.11
RFFL-201ENST00000315249 KLC3Q6P597 504 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 ARHGAP24Q8N264 748 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 PYROXD1Q8WU10 500 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 KLC2Q9H0B6 622 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 FAM205CA6NFA0 338 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 PBKQ96KB5 322 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 ABI2Q9NYB9 513 aaPredicted RBP14.37□□□□□ -0.11
RFFL-201ENST00000315249 IQGAP1P46940 1657 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 SMAD1Q15797 465 aaKnown RBP14.37□□□□□ -0.11
RFFL-201ENST00000315249 FAM71BQ8TC56 605 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 RMDN1Q96DB5 314 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 REEP2Q9BRK0 252 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 TMEM39AQ9NV64 488 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 TNS2Q63HR2 1409 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 DDTLA6NHG4 134 aaPredicted RBP14.37□□□□□ -0.11
RFFL-201ENST00000315249 GOLGA8MH3BSY2 632 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 ASMTLO95671 621 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 VTNP04004 478 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 ETF1P62495 437 aaKnown RBP14.37□□□□□ -0.11
RFFL-201ENST00000315249 KIZQ2M2Z5 673 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 RMDN2Q96LZ7 410 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 TRIM62Q9BVG3 475 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 KCNQ5Q9NR82 932 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 ZC3H11AO75152 810 aaKnown RBP eCLIP14.37□□□□□ -0.11
RFFL-201ENST00000315249 FTLP02792 175 aaPredicted RBP14.37□□□□□ -0.11
RFFL-201ENST00000315249 CA4P22748 312 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 RFC5P40937 340 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 PPP4CP60510 307 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 BFSP2Q13515 415 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 GLRA4Q5JXX5 417 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 CEP72Q9P209 647 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 PPLO60437 1756 aa14.37□□□□□ -0.11
RFFL-201ENST00000315249 ZNF286BP0CG31 522 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 PLS3P13797 630 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 AP3M2P53677 418 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 NCOA4Q13772 614 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 ZNF235Q14590 738 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 DHX38Q92620 1227 aaKnown RBP14.36□□□□□ -0.11
RFFL-201ENST00000315249 L3MBTL3Q96JM7 780 aaPredicted RBP14.36□□□□□ -0.11
RFFL-201ENST00000315249 TIPINQ9BVW5 301 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 GOLPH3LQ9H4A5 285 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 AFF4Q9UHB7 1163 aaKnown RBP14.36□□□□□ -0.11
RFFL-201ENST00000315249 TXNDC9O14530 226 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 E5RI56 91 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 CYP2C8P10632 490 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 GFPT1Q06210 699 aaPredicted RBP14.36□□□□□ -0.11
RFFL-201ENST00000315249 USP50Q70EL3 339 aaPredicted RBP14.36□□□□□ -0.11
RFFL-201ENST00000315249 CCHCR1Q8TD31 782 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 RAB3IPQ96QF0 476 aaPredicted RBP14.36□□□□□ -0.11
RFFL-201ENST00000315249 MUC3BQ9H195 1237 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 COL5A2P05997 1499 aaPredicted RBP14.36□□□□□ -0.11
RFFL-201ENST00000315249 GPR182O15218 404 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 SULT1E1P49888 294 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 SDE2Q6IQ49 451 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms