RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 NCK2O43639 380 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 ZC3H11AO75152 810 aaKnown RBP eCLIP16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 MLH1P40692 756 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 SF3A1Q15459 793 aaKnown RBP16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 EEF1DP3Q658K8 133 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 PTCRAQ6ISU1 281 aaPredicted RBP16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 SLC27A1Q6PCB7 646 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 RNF168Q8IYW5 571 aaPredicted RBP16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 CNNM3Q8NE01 707 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 KHSRPQ92945 711 aaKnown RBP eCLIP16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 IGSF21Q96ID5 467 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 TCF25Q9BQ70 676 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 ZBP1Q9H171 429 aa16.14■□□□□ 0.17
PPP1CA-201ENST00000312989 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 ARL5CA6NH57 179 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 ACKR2O00590 384 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 PER2O15055 1255 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 HIP1RO75146 1068 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 NPTXRO95502 500 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 POMCP01189 267 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 ITGA4P13612 1032 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 GUCY2CP25092 1073 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 NT5DC1Q5TFE4 455 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 PLPP4Q5VZY2 271 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 PDE12Q6L8Q7 609 aaKnown RBP16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 RBM23Q86U06 439 aaKnown RBP16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 FAM178BQ8IXR5 827 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 COLGALT2Q8IYK4 626 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 KIFAP3Q92845 792 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 GAD1Q99259 594 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 IGFLR1Q9H665 355 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 BLOC1S4Q9NUP1 217 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 ARHGAP28Q9P2N2 729 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 BARX2Q9UMQ3 279 aaPredicted RBP16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 DNM3Q9UQ16 869 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 CLIC4Q9Y696 253 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 ZMYM2Q9UBW7 1377 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 C2orf71A6NGG8 1288 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 F8W810 466 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 ABLIM1O14639 778 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 MBTPS2O43462 519 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 PRKCBP05771 671 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 AKAP5P24588 427 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 NPTX2P47972 431 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 SCNN1GP51170 649 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 ARSHQ5FYA8 562 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 TMEM184AQ6ZMB5 413 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 KCTD17Q8N5Z5 321 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 SYT2Q8N9I0 419 aaPredicted RBP16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 AK8Q96MA6 479 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 C2orf40Q9H1Z8 148 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 NGRNQ9NPE2 291 aaKnown RBP16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 GIT1Q9Y2X7 761 aa16.13■□□□□ 0.17
PPP1CA-201ENST00000312989 PDCP20941 246 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 ALDH7A1P49419 539 aaKnown RBP16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 COASYQ13057 564 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 NAB2Q15742 525 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 SMAD2Q15796 467 aaKnown RBP16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 USP49Q70CQ1 688 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 DDX53Q86TM3 631 aaKnown RBP16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 MRPL43Q8N983 215 aaKnown RBP16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 SMRP1Q8NCR6 262 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 DEPTORQ8TB45 409 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 PLIN2Q99541 437 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 TMEM175Q9BSA9 504 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 TLE6Q9H808 572 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 PTPRHQ9HD43 1115 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 UBN1Q9NPG3 1134 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 FBXO2Q9UK22 296 aaPredicted RBP16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 IRAK3Q9Y616 596 aa16.12■□□□□ 0.17
PPP1CA-201ENST00000312989 PTGESO14684 152 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 NRP1O14786 923 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 LILRB3O75022 631 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 CTSAP10619 480 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 PRPF4BQ13523 1007 aaKnown RBP16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 PPP2R5AQ15172 486 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 CLUL1Q15846 466 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 MAPK6Q16659 721 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 CABP7Q86V35 215 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 URGCPQ8TCY9 931 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 AUTS2Q8WXX7 1259 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 KCNN1Q92952 543 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 CDCA3Q99618 268 aaPredicted RBP16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 NTPCRQ9BSD7 190 aaKnown RBP16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 GBP3Q9H0R5 595 aa16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 MORC2Q9Y6X9 1032 aaPredicted RBP16.11■□□□□ 0.17
PPP1CA-201ENST00000312989 TCF20Q9UGU0 1960 aaKnown RBP16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 C19orf67A6NJJ6 358 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 MEFVO15553 781 aaPredicted RBP16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 SLC26A4O43511 780 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 BMP15O95972 392 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 PLA2G4BP0C869 781 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 PROZP22891 400 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 LONP1P36776 959 aaKnown RBP16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 PEX3P56589 373 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 KRT17Q04695 432 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 ZP2Q05996 745 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms