RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 STAT6P42226 847 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 RBM10P98175 930 aaKnown RBP13.28□□□□□ -0.28
SCFD1-201ENST00000311943 CDC42EP1Q00587 391 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 PRPF4BQ13523 1007 aaKnown RBP13.28□□□□□ -0.28
SCFD1-201ENST00000311943 MYCT1Q8N699 235 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 TMEM161BQ8NDZ6 487 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 GSTCDQ8NEC7 633 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 KIFAP3Q92845 792 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 SPATA32Q96LK8 384 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 CHST12Q9NRB3 414 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 SNTG2Q9NY99 539 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 ARHGAP28Q9P2N2 729 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 STXBP5LQ9Y2K9 1186 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 K7ERI5 159 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 CUTAO60888 179 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 ITGB1P05556 798 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 PLS3P13797 630 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 BMPR1AP36894 532 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 POU5F1BQ06416 359 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 GPM6BQ13491 265 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 MAPK6Q16659 721 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 ZBTB41Q5SVQ8 909 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 ODR4Q5SWX8 454 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 SPOUT1Q5T280 376 aaKnown RBP13.27□□□□□ -0.28
SCFD1-201ENST00000311943 SFR1Q86XK3 245 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 MAFAQ8NHW3 353 aaPredicted RBP13.27□□□□□ -0.28
SCFD1-201ENST00000311943 CLP1Q92989 425 aaKnown RBP13.27□□□□□ -0.28
SCFD1-201ENST00000311943 IFT74Q96LB3 600 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 PAAF1Q9BRP4 392 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 NFKBIZQ9BYH8 718 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 TBC1D13Q9NVG8 400 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 DACT1Q9NYF0 836 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 GDAQ9Y2T3 454 aa13.27□□□□□ -0.28
SCFD1-201ENST00000311943 CNTNAP2Q9UHC6 1331 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 TMEM265A0A087WTH1 108 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 ACKR2O00590 384 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 ABLIM1O14639 778 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 KRT18P05783 430 aaKnown RBP13.27□□□□□ -0.29
SCFD1-201ENST00000311943 AFMP43652 599 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 SCNN1GP51170 649 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 DMP1Q13316 513 aaPredicted RBP13.27□□□□□ -0.29
SCFD1-201ENST00000311943 TMEM132AQ24JP5 1023 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 GLRA4Q5JXX5 417 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 NOTUMQ6P988 496 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 ZBTB8OSQ8IWT0 167 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 CMTR2Q8IYT2 770 aaKnown RBP13.27□□□□□ -0.29
SCFD1-201ENST00000311943 ZSWIM2Q8NEG5 633 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 ELAC1Q9H777 363 aaKnown RBP13.27□□□□□ -0.29
SCFD1-201ENST00000311943 NRDE2Q9H7Z3 1164 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 SERTAD1Q9UHV2 236 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
SCFD1-201ENST00000311943 IDEP14735 1019 aa13.26□□□□□ -0.29
SCFD1-201ENST00000311943 RESP18Q5W5W9 173 aa13.26□□□□□ -0.29
SCFD1-201ENST00000311943 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
SCFD1-201ENST00000311943 HAUS6Q7Z4H7 955 aa13.26□□□□□ -0.29
SCFD1-201ENST00000311943 MRPL10Q7Z7H8 261 aaKnown RBP13.26□□□□□ -0.29
SCFD1-201ENST00000311943 ADGRD2Q7Z7M1 963 aa13.26□□□□□ -0.29
SCFD1-201ENST00000311943 FEZF2Q8TBJ5 459 aa13.26□□□□□ -0.29
SCFD1-201ENST00000311943 DRC1Q96MC2 740 aa13.26□□□□□ -0.29
SCFD1-201ENST00000311943 TMEM117Q9H0C3 514 aa13.26□□□□□ -0.29
SCFD1-201ENST00000311943 ARL5CA6NH57 179 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 H3BNC9 293 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ZNF623O75123 536 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ZC3H11AO75152 810 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCFD1-201ENST00000311943 MAPTP10636 758 aaKnown RBP13.25□□□□□ -0.29
SCFD1-201ENST00000311943 PFKFB1P16118 471 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 NDUFA8P51970 172 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ERVFC1P60507 584 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 KRT85P78386 507 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 TFF2Q03403 129 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 SPAG1Q07617 926 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ATF7IP2Q5U623 682 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 SLC39A4Q6P5W5 647 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 SLC27A1Q6PCB7 646 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ABI1Q8IZP0 508 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 COLGALT1Q8NBJ5 622 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 KCNG4Q8TDN1 519 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 FAM84AQ96KN4 292 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 GAS2L1Q99501 681 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ACO2Q99798 780 aaKnown RBP13.25□□□□□ -0.29
SCFD1-201ENST00000311943 NTPCRQ9BSD7 190 aaKnown RBP13.25□□□□□ -0.29
SCFD1-201ENST00000311943 TRAIPQ9BWF2 469 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 RSAD1Q9HA92 442 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 PRMT7Q9NVM4 692 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ANKFY1Q9P2R3 1169 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 PARP2Q9UGN5 583 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 CFAP45Q9UL16 551 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ANKRD63C9JTQ0 380 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 K7ENM7 598 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 TRAK2O60296 914 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 FAM13AO94988 1023 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 EOMESO95936 686 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 MYBP10242 640 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ITGA4P13612 1032 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ZNF131P52739 623 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 NCKAP1LP55160 1127 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 CUL4BQ13620 913 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms