RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ZNF569Q5MCW4 686 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 METTL13Q8N6R0 699 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 OR6J1Q8NGC5 347 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 TACO1Q9BSH4 297 aaKnown RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 MRPL47Q9HD33 250 aaKnown RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 BLOC1S4Q9NUP1 217 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 RABL2AQ9UBK7 228 aaPredicted RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 HYOU1Q9Y4L1 999 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 COL11A2P13942 1736 aaPredicted RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 CLDN3O15551 220 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 MSCO60682 206 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 PPFIA4O75335 1185 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 AP1G2O75843 785 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 PIK3CAP42336 1068 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ABL2P42684 1182 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 LIG3P49916 1009 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 POLR2FP61218 127 aaKnown RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 KCNH2Q12809 1159 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SEPT6Q14141 434 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 EARS2Q5JPH6 523 aaKnown RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SRGAP1Q7Z6B7 1085 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 EFCAB13Q8IY85 973 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 PIGOQ8TEQ8 1089 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 DDX27Q96GQ7 796 aaKnown RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 P2RX7Q99572 595 aaKnown RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SGIP1Q9BQI5 828 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SYNCQ9H7C4 482 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 FAM207AQ9NSI2 230 aaPredicted RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 VAV3Q9UKW4 847 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SYNGAP1Q96PV0 1343 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 CCDC189A1A4V9 331 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ADM5C9JUS6 153 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SLITRK3O94933 977 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 NDUFA10O95299 355 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 CFAP221Q4G0U5 840 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ARMC3Q5W041 872 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ZNF720Q7Z2F6 126 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 CLEC4DQ8WXI8 215 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 RSPH1Q8WYR4 309 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 USP6NLQ92738 828 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ZBTB10Q96DT7 871 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 PBKQ96KB5 322 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 STK33Q9BYT3 514 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 HOMER3Q9NSC5 361 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ADAMTS5Q9UNA0 930 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 AKT3Q9Y243 479 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ITM2BQ9Y287 266 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 Q9Y3F1 56 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SCINQ9Y6U3 715 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 A6NNZ2 444 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 UBE2Q2LH0YL09 131 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 PPP1R11O60927 126 aaPredicted RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ARP10275 920 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 KRT5P13647 590 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 POU5F1BQ06416 359 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 STK4Q13043 487 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 TUBB8Q3ZCM7 444 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 PDXDC1Q6P996 788 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 USP49Q70CQ1 688 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SPDL1Q96EA4 605 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SPATA17Q96L03 361 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 TRIM62Q9BVG3 475 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 TMEM8AQ9HCN3 771 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 PARP2Q9UGN5 583 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 MYH6P13533 1939 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 MIF4GDA9UHW6 222 aaKnown RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 ATP8B1O43520 1251 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SMIM24O75264 130 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 DMPKQ09013 629 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 BFSP1Q12934 665 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 TMEM132BQ14DG7 1078 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 NCAPHQ15003 741 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 RGMBQ6NW40 437 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 CYFIP1Q7L576 1253 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 NME8Q8N427 588 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 PCSK9Q8NBP7 692 aaKnown RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 AFAP1L1Q8TED9 768 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 SUGCTQ9HAC7 445 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 HAUS2Q9NVX0 235 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 MORF4L1Q9UBU8 362 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 DDX41Q9UJV9 622 aaKnown RBP6.45□□□□□ -1.38
SEC22A-201ENST00000309934 AMFRQ9UKV5 643 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 TBX20Q9UMR3 447 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 GUCA1BQ9UMX6 200 aa6.45□□□□□ -1.38
SEC22A-201ENST00000309934 IGLV3-22A0A075B6J6 115 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 KLHL33A6NCF5 533 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 CREB3O43889 395 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 RARRES1P49788 294 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 GRIN1Q05586 938 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 NOGQ13253 232 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 LRRC41Q15345 812 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 RPS6KA1Q15418 735 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 KIAA0753Q2KHM9 967 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 HSP90AA4PQ58FG1 418 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 SLC30A10Q6XR72 485 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 ZNF662Q6ZS27 426 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 C1orf186Q6ZWK4 172 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 FBXL13Q8NEE6 735 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms