RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 NPLOC4Q8TAT6 608 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 KIAA1524Q8TCG1 905 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 ACER1Q8TDN7 264 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 FBF1Q8TES7 1133 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 TGFBRAP1Q8WUH2 860 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 FAM161BQ96MY7 647 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 JAKMIP1Q96N16 626 aaKnown RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 NEUROD6Q96NK8 337 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 PAGR1Q9BTK6 254 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 CCDC94Q9BW85 323 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 GPR62Q9BZJ7 368 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 PIH1D3Q9NQM4 214 aaKnown RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 SIRT5Q9NXA8 310 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 RAI14Q9P0K7 980 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 BTBD7Q9P203 1132 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 PI4KBQ9UBF8 816 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 FAM8A1Q9UBU6 413 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 SAP30BPQ9UHR5 308 aaKnown RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 HERC5Q9UII4 1024 aaKnown RBP5.61□□□□□ -1.51
CKS1B-201ENST00000308987 MYRFQ9Y2G1 1151 aa5.61□□□□□ -1.51
CKS1B-201ENST00000308987 GREB1LQ9C091 1923 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 MYH4Q9Y623 1939 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 GIPC1O14908 333 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 SLC27A2O14975 620 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 CTAGE5O15320 804 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 NEMFO60524 1076 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 GH2P01242 217 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 LDHCP07864 332 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 ASNSP08243 561 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 RPS6KB1P23443 525 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 MAPK4P31152 587 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 PTH1RQ03431 593 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 PABPC4Q13310 644 aaKnown RBP eCLIP5.6□□□□□ -1.513e-23■□□□□ 9
CKS1B-201ENST00000308987 DHX8Q14562 1220 aaKnown RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 CCDC85BQ15834 202 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 KIAA1755Q5JYT7 1200 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 LARP1BQ659C4 914 aaKnown RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 FAM109BQ6ICB4 259 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 BLOC1S2Q6QNY1 142 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 NOL8Q76FK4 1167 aaKnown RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 PLEKHH3Q7Z736 793 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 CCDC83Q8IWF9 413 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 SOCS4Q8WXH5 440 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 CHAMP1Q96JM3 812 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 C12orf42Q96LP6 360 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 APBA2Q99767 749 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 LLPHQ9BRT6 129 aaKnown RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 NUP62CLQ9H1M0 184 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 TTYH1Q9H313 450 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 ZSCAN16Q9H4T2 348 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 C12orf49Q9H741 205 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 CNTD2Q9H8S5 307 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 AS3MTQ9HBK9 375 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 KIF3AQ9Y496 699 aa5.6□□□□□ -1.51
CKS1B-201ENST00000308987 RBM8AQ9Y5S9 174 aaKnown RBP5.6□□□□□ -1.51
CKS1B-201ENST00000308987 PRRC2BQ5JSZ5 2229 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 LCTP09848 1927 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 A0A1W2PRG0 241 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 GOLGA6L4A6NEF3 574 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 NOTOA8MTQ0 251 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 C19orf81C9J6K1 198 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 SMIM22K7EJ46 135 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 N4BP3O15049 544 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 CTIFO43310 598 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 FIBPO43427 364 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 AKAP8O43823 692 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 LARGE1O95461 756 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 HMGB1P09429 215 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 HOXC6P09630 235 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 CYBAP13498 195 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 ATP5JP18859 108 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 ITGB8P26012 769 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 CYP2C19P33261 490 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 SHMT1P34896 483 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 RGS2P41220 211 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 PLCD1P51178 756 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 EPHB4P54760 987 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 RTP1P59025 263 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 CHMP4BP1P59074 171 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 GSTO1P78417 241 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 NMIQ13287 307 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 GRB14Q14449 540 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 SHHQ15465 462 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 ZYXQ15942 572 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 ME3Q16798 604 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 DNTTIP2Q5QJE6 756 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 GJC2Q5T442 439 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 ADGRF1Q5T601 910 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 UTP14CQ5TAP6 766 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 ANO1Q5XXA6 986 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 NAA16Q6N069 864 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 TATDN1Q6P1N9 297 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 CATSPERGQ6ZRH7 1159 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 FRMD5Q7Z6J6 570 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 AACSQ86V21 672 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 FOXP4Q8IVH2 680 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 TMEFF1Q8IYR6 380 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 ANKS4BQ8N8V4 417 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 DNAJB8Q8NHS0 232 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms