RNA–Protein interactions for RNA: ENST00000307979.7

SNAPC5-201, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAPC5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-201ENST00000307979 H0YCG3 227 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 FAM13AO94988 1023 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 BRD1O95696 1058 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 ITGB1P05556 798 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 STAT6P42226 847 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 ME1P48163 572 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 ALDH7A1P49419 539 aaKnown RBP12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 UBE3AQ05086 875 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 DNM1Q05193 864 aaKnown RBP12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 STRN3Q13033 797 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 ARSHQ5FYA8 562 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 KCNT2Q6UVM3 1135 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 LRRC55Q6ZSA7 311 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 SPPL3Q8TCT6 385 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 FAM193BQ96PV7 902 aaPredicted RBP12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 APOL6Q9BWW8 343 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 PDZD7Q9H5P4 517 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 TBC1D13Q9NVG8 400 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 ARHGAP28Q9P2N2 729 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 GIT1Q9Y2X7 761 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
SNAPC5-201ENST00000307979 NPHP3-ACAD11A0A0J9YXS1 232 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 SLC16A4O15374 487 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 ZC3H11AO75152 810 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 FGF18O76093 207 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 SCP2P22307 547 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 KRT17Q04695 432 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 DCAF4L1Q3SXM0 396 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 ATF7IP2Q5U623 682 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 SV2BQ7L1I2 683 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 MYCT1Q8N699 235 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 LRRC15Q8TF66 581 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 POF1BQ8WVV4 589 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 PANK2Q9BZ23 570 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 GBP3Q9H0R5 595 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 NXF3Q9H4D5 531 aaKnown RBP12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 ZHX3Q9H4I2 956 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 PARVGQ9HBI0 331 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 SPG21Q9NZD8 308 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 PARP2Q9UGN5 583 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 TNFSF13BQ9Y275 285 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 HES2Q9Y543 173 aa12.88□□□□□ -0.35
SNAPC5-201ENST00000307979 CHD7Q9P2D1 2997 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 RALGAPA2Q2PPJ7 1873 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 COL4A4P53420 1690 aaPredicted RBP12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 CSPG5O95196 566 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 MLH1P40692 756 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 BCAR1P56945 870 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 KRT85P78386 507 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 PLCB3Q01970 1234 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 GIT2Q14161 759 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 NT5DC1Q5TFE4 455 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 PDILTQ8N807 584 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 TMEM161BQ8NDZ6 487 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 MRPS27Q92552 414 aaKnown RBP12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 TMEM169Q96HH4 297 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 RPS6KC1Q96S38 1066 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 GAD1Q99259 594 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 LRRC27Q9C0I9 530 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 COG5Q9UP83 839 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 LZTS1Q9Y250 596 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 USP20Q9Y2K6 914 aa12.87□□□□□ -0.35
SNAPC5-201ENST00000307979 PRRC2BQ5JSZ5 2229 aaKnown RBP12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 ZMYM2Q9UBW7 1377 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 ARL5CA6NH57 179 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 INPPL1O15357 1258 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 TRAK2O60296 914 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 POMCP01189 267 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 EDN1P05305 212 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 MAPTP10636 758 aaKnown RBP12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 AKAP5P24588 427 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 ABCD1P33897 745 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 PBX3P40426 434 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 ZNF131P52739 623 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 ZNF568Q3ZCX4 644 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 EEF1DP3Q658K8 133 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 PDE12Q6L8Q7 609 aaKnown RBP12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 DYMQ7RTS9 669 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 TAS1R3Q7RTX0 852 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 HAUS6Q7Z4H7 955 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 FAM178BQ8IXR5 827 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 SLC39A11Q8N1S5 342 aa12.86□□□□□ -0.35
SNAPC5-201ENST00000307979 HLA-CQ95604 372 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms