RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 IKBKBO14920 756 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 ZC3H11AO75152 810 aaKnown RBP eCLIP11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 VTNP04004 478 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 RAD51Q06609 339 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 KRT31Q15323 416 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 WHAMMP3Q1A5X7 153 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 FAF2Q96CS3 445 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 CCDC160A6NGH7 325 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 CASP2P42575 452 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 POTEAQ6S8J7 498 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 PDS5AQ29RF7 1337 aaKnown RBP11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 KPNA6O60684 536 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 ADORA2AP29274 412 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 STOX1Q6ZVD7 989 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 PCSK1NQ9UHG2 260 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 ATP2C1P98194 919 aaPredicted RBP11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 SEPT8Q92599 483 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 INTS2Q9H0H0 1204 aaKnown RBP11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 GPRC5DQ9NZD1 345 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 TUBE1Q9UJT0 475 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 TLK1Q9UKI8 766 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 PCDHB12Q9Y5F1 795 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 AFDNP55196 1824 aaKnown RBP11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 ECEL1O95672 775 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 ATICP31939 592 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 SULT1E1P49888 294 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 NSUN2Q08J23 767 aaKnown RBP eCLIP11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 ENOX1Q8TC92 643 aaKnown RBP11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 MTG1Q9BT17 334 aaPredicted RBP11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 HSPBP1Q9NZL4 362 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 FIS1Q9Y3D6 152 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 NR2E3Q9Y5X4 410 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 PVALEFA0A1B0GWK0 134 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 IL18RAPO95256 599 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 MUC3BQ9H195 1237 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 XPNPEP3Q9NQH7 507 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 CDC26Q8NHZ8 85 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 ASCC2Q9H1I8 757 aaPredicted RBP11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 PRMT7Q9NVM4 692 aaPredicted RBP11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 PPP1R9AQ9ULJ8 1098 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 IGFBP4P22692 258 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 C11orf70Q9BRQ4 267 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 UNC45AQ9H3U1 944 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 TRIM49P0CI25 452 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 TRIM49CP0CI26 452 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 VGLL4Q14135 290 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 PDIA5Q14554 519 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 ARHGEF2Q92974 986 aaKnown RBP11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 EXT2Q93063 718 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 GPRASP2Q96D09 838 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 EBAG9O00559 213 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 RBBP5Q15291 538 aaKnown RBP11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 TRPV6Q9H1D0 765 aa11.41□□□□□ -0.58
SYNPO2-201ENST00000307142 EFCAB8A8MWE9 144 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 FKTNO75072 461 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 ZBED6P86452 979 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 GUCY2DQ02846 1103 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 KIZQ2M2Z5 673 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 SARS2Q9NP81 518 aaKnown RBP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 ABI2Q9NYB9 513 aaPredicted RBP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 SOWAHDA6NJG2 315 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 DCP1BQ8IZD4 617 aaKnown RBP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 REEP2Q9BRK0 252 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 PXMP2Q9NR77 195 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 HOMER3Q9NSC5 361 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 TSR3Q9UJK0 312 aaKnown RBP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 LTN1O94822 1766 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 PI4K2BG5E9Z4 385 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 TROVE2P10155 538 aaKnown RBP eCLIP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 ELF2Q15723 593 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 CCHCR1Q8TD31 782 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 PHF20Q9BVI0 1012 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 DHX35Q9H5Z1 703 aaKnown RBP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 CALCOCO1Q9P1Z2 691 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 FAM8A1Q9UBU6 413 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 INHBEP58166 350 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 DRP2Q13474 957 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 LY6KQ17RY6 165 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 CYP4F22Q6NT55 531 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 DHX38Q92620 1227 aaKnown RBP11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 MCUR1Q96AQ8 359 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 ODC1P11926 461 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 ATP11AP98196 1134 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 ANKRD20A3Q5VUR7 823 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 FBXL13Q8NEE6 735 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 DPF2Q92785 391 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 CPB2Q96IY4 423 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 RABEP2Q9H5N1 569 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 CEP72Q9P209 647 aa11.4□□□□□ -0.58
SYNPO2-201ENST00000307142 H7C4K7 107 aa11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 MSH2P43246 934 aa11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 PPATQ06203 517 aa11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 ZNF235Q14590 738 aa11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 DRAP1Q14919 205 aaPredicted RBP11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 ZNF746Q6NUN9 644 aaPredicted RBP11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms