RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 KYNUQ16719 465 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 MIIPQ5JXC2 388 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 KCNK18Q7Z418 384 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 KIF2BQ8N4N8 673 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 SLC4A9Q96Q91 983 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 MED15Q96RN5 788 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 ZWILCHQ9H900 591 aa14.19□□□□□ -0.14
DDX54-201ENST00000306014 TJP3O95049 919 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 SCP2P22307 547 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 CAV1Q03135 178 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 FUT2Q10981 343 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 TTMPQ5BVD1 217 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 SCARA5Q6ZMJ2 495 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 FBXO25Q8TCJ0 367 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 TTC17Q96AE7 1141 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 USP15Q9Y4E8 981 aaPredicted RBP14.18□□□□□ -0.14
DDX54-201ENST00000306014 TMEM120BA0PK00 339 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 MCF2LO15068 1137 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 CAND2O75155 1236 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 FAM160B2Q86V87 743 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 SYT2Q8N9I0 419 aaPredicted RBP14.18□□□□□ -0.14
DDX54-201ENST00000306014 MORC4Q8TE76 937 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 PPP4R1Q8TF05 950 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 MAML1Q92585 1016 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 FAM118BQ9BPY3 351 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 RUSC1Q9BVN2 902 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 PABPC3Q9H361 631 aaKnown RBP14.18□□□□□ -0.14
DDX54-201ENST00000306014 SCINQ9Y6U3 715 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 TBX3O15119 743 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 ELF1P32519 619 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 ARL1P40616 181 aaPredicted RBP14.18□□□□□ -0.14
DDX54-201ENST00000306014 GPS1Q13098 491 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 PSMD6Q15008 389 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 ZBTB33Q86T24 672 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 LRRC34Q8IZ02 419 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 ACTRT1Q8TDG2 376 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 TUFT1Q9NNX1 390 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.18□□□□□ -0.14
DDX54-201ENST00000306014 K7ERI5 159 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 OSTNP61366 133 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 EPHA7Q15375 998 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 LMBRD2Q68DH5 695 aaPredicted RBP14.18□□□□□ -0.14
DDX54-201ENST00000306014 FBXL13Q8NEE6 735 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 C18orf8Q96DM3 657 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 ARL2BPQ9Y2Y0 163 aa14.18□□□□□ -0.14
DDX54-201ENST00000306014 NRXN3Q9Y4C0 1643 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 TLR3O15455 904 aaKnown RBP14.17□□□□□ -0.14
DDX54-201ENST00000306014 C21orf2O43822 256 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 PDHA1P08559 390 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 MAPK7Q13164 816 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 PIK3C2AO00443 1686 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 FOXN3O00409 490 aaPredicted RBP14.17□□□□□ -0.14
DDX54-201ENST00000306014 DIAPH2O60879 1101 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 YARSP54577 528 aaKnown RBP14.17□□□□□ -0.14
DDX54-201ENST00000306014 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 DARS2Q6PI48 645 aaKnown RBP14.17□□□□□ -0.14
DDX54-201ENST00000306014 SPATA24Q86W54 205 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 ZBED8Q8IZ13 594 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 MSL3Q8N5Y2 521 aaKnown RBP14.17□□□□□ -0.14
DDX54-201ENST00000306014 KCTD6Q8NC69 237 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 ZNF341Q9BYN7 854 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 CDC42EP5Q6NZY7 148 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 FBXO41Q8TF61 875 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 HSPBP1Q9NZL4 362 aa14.17□□□□□ -0.14
DDX54-201ENST00000306014 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
DDX54-201ENST00000306014 PJA2O43164 708 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 IRX4P78413 519 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 GIT2Q14161 759 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 KCTD19Q17RG1 926 aaPredicted RBP14.16□□□□□ -0.14
DDX54-201ENST00000306014 DALRD3Q5D0E6 543 aaKnown RBP14.16□□□□□ -0.14
DDX54-201ENST00000306014 SEPT14Q6ZU15 432 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 PODNQ7Z5L7 613 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 EPS8L3Q8TE67 593 aaKnown RBP14.16□□□□□ -0.14
DDX54-201ENST00000306014 RMDN3Q96TC7 470 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 MSTO1Q9BUK6 570 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 KLHL11Q9NVR0 708 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 ZFP69BQ9UJL9 534 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 TTLL3Q9Y4R7 772 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 FMN2Q9NZ56 1722 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 GYG2O15488 501 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 P4HA1P13674 534 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 SERPINB6P35237 376 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 PSMC6P62333 389 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 AP1ARQ63HQ0 302 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 TRMT10CQ7L0Y3 403 aaKnown RBP14.16□□□□□ -0.14
DDX54-201ENST00000306014 ERICH1Q86X53 443 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 RHOT1Q8IXI2 618 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 ATL2Q8NHH9 583 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 TRIM55Q9BYV6 548 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 RIOX1Q9H6W3 641 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 VCPKMTQ9H867 229 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 AIPL1Q9NZN9 384 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 PI4K2BG5E9Z4 385 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 SKIP12755 728 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 SLC8A3P57103 927 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 PDIA2Q13087 525 aaKnown RBP14.16□□□□□ -0.14
DDX54-201ENST00000306014 RINT1Q6NUQ1 792 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 MAP7D3Q8IWC1 876 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 RAB3IL1Q8TBN0 382 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 SPDL1Q96EA4 605 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms