RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 VPS52Q8N1B4 723 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 DEPTORQ8TB45 409 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 IGSF21Q96ID5 467 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 MSLNLQ96KJ4 702 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 IFT74Q96LB3 600 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 PRIMPOLQ96LW4 560 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 EIF2AQ9BY44 585 aaKnown RBP12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 BHMT2Q9H2M3 363 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 DDX19AQ9NUU7 478 aaKnown RBP12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 CLEC1BQ9P126 229 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 DNAJB4Q9UDY4 337 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 KIAA1024Q9UPX6 916 aa12.03□□□□□ -0.48
HMGN1P35-201ENST00000303758 MYH11P35749 1972 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 B4GALT5O43286 388 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 NR1I2O75469 434 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 CXCL14O95715 111 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 GALTP07902 379 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 CYP11B2P19099 503 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 MLH1P40692 756 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 PRPHP41219 470 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 TOB1P50616 345 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 GIT2Q14161 759 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 PDIA5Q14554 519 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 ZRSR1Q15695 479 aaKnown RBP12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 AMHR2Q16671 573 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 CDCA2Q69YH5 1023 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 TMEM173Q86WV6 379 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 CDR2LQ86X02 465 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 ZNF280BQ86YH2 543 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 C4orf32Q8N8J7 132 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 IGSF22Q8N9C0 903 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 SMRP1Q8NCR6 262 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 SMG8Q8ND04 991 aaKnown RBP12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 CASP10Q92851 521 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 RPS6KC1Q96S38 1066 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 TMEM175Q9BSA9 504 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 ZBP1Q9H171 429 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 NXF3Q9H4D5 531 aaKnown RBP12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 EPHX3Q9H6B9 360 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 CD320Q9NPF0 282 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 STK39Q9UEW8 545 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 PARP2Q9UGN5 583 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 FAN1Q9Y2M0 1017 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 HES2Q9Y543 173 aa12.02□□□□□ -0.49
HMGN1P35-201ENST00000303758 C2orf71A6NGG8 1288 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 ARL5CA6NH57 179 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 N4BP3O15049 544 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 DDHD2O94830 711 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 EYA4O95677 639 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 ALDH2P05091 517 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 PRKCBP05771 671 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 ALADP13716 330 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 NAMPTP43490 491 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 OR1G1P47890 313 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 SCNN1GP51170 649 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 RBM10P98175 930 aaKnown RBP12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 PRPF4BQ13523 1007 aaKnown RBP12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 MAPK6Q16659 721 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 DDX53Q86TM3 631 aaKnown RBP12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 MRPL43Q8N983 215 aaKnown RBP12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 KIFAP3Q92845 792 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 GAD1Q99259 594 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 ADPGKQ9BRR6 497 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 APOL5Q9BWW9 433 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 DNM3Q9UQ16 869 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 GIT1Q9Y2X7 761 aa12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 PRG3Q9Y2Y8 225 aaPredicted RBP12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 USP15Q9Y4E8 981 aaPredicted RBP12.01□□□□□ -0.49
HMGN1P35-201ENST00000303758 PP2D1A8MPX8 630 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 NRP1O14786 923 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 SSBP05455 408 aaKnown RBP eCLIP12□□□□□ -0.49
HMGN1P35-201ENST00000303758 CTSAP10619 480 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 COL9A1P20849 921 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 AKAP5P24588 427 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 AFF1P51825 1210 aaKnown RBP12□□□□□ -0.49
HMGN1P35-201ENST00000303758 ECM1Q16610 540 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 TPRNQ4KMQ1 711 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 TMEM31Q5JXX7 168 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 ANKRD54Q6NXT1 300 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 VN1R2Q8NFZ6 395 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 BCL7CQ8WUZ0 217 aaPredicted RBP12□□□□□ -0.49
HMGN1P35-201ENST00000303758 AUTS2Q8WXX7 1259 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 BSNDQ8WZ55 320 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 KHSRPQ92945 711 aaKnown RBP eCLIP12□□□□□ -0.49
HMGN1P35-201ENST00000303758 CDK5RAP3Q96JB5 506 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 ZFP42Q96MM3 310 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 HCFC2Q9Y5Z7 792 aa12□□□□□ -0.49
HMGN1P35-201ENST00000303758 A0A1B0GUA9 196 aa11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 VPS37CA5D8V6 355 aaPredicted RBP11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 VWA3AA6NCI4 1184 aa11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 FAM86C2PA6NEL3 165 aa11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 CCDC169A6NNP5 214 aa11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 E9PMD0 336 aa11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 PI4K2BG5E9Z4 385 aa11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 DCXO43602 365 aa11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 B4GALT3O60512 393 aa11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 CLASP2O75122 1294 aaKnown RBP11.99□□□□□ -0.49
HMGN1P35-201ENST00000303758 URODP06132 367 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms