RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 USP49Q70CQ1 688 aa22.4■■□□□ 1.18
LETM1-201ENST00000302787 ST13P4Q8IZP2 240 aaPredicted RBP22.4■■□□□ 1.18
LETM1-201ENST00000302787 VPS11Q9H270 941 aa22.4■■□□□ 1.18
LETM1-201ENST00000302787 FAM96AQ9H5X1 160 aa22.4■■□□□ 1.18
LETM1-201ENST00000302787 KIF9Q9HAQ2 790 aa22.4■■□□□ 1.18
LETM1-201ENST00000302787 RGL1Q9NZL6 768 aa22.4■■□□□ 1.18
LETM1-201ENST00000302787 TRIM10Q9UDY6 481 aa22.4■■□□□ 1.18
LETM1-201ENST00000302787 SSU72P8A0A1W2PR75 194 aa22.39■■□□□ 1.18
LETM1-201ENST00000302787 ICE2Q659A1 982 aa22.39■■□□□ 1.18
LETM1-201ENST00000302787 APOEP02649 317 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 CSF1RP07333 972 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 ZC3H18Q86VM9 953 aaKnown RBP22.39■■□□□ 1.17
LETM1-201ENST00000302787 PRPF38AQ8NAV1 312 aaKnown RBP22.39■■□□□ 1.17
LETM1-201ENST00000302787 ANKRD7Q92527 254 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 TOPORSQ9NS56 1045 aaPredicted RBP22.39■■□□□ 1.17
LETM1-201ENST00000302787 SLC9A2Q9UBY0 812 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 CCDC195A0A1B0GUA6 201 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 KPNA7A9QM74 516 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 FGFR4P22455 802 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 ZNF772Q68DY9 489 aaPredicted RBP22.39■■□□□ 1.17
LETM1-201ENST00000302787 SENP2Q9HC62 589 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 EPB41L4AQ9HCS5 686 aaPredicted RBP22.39■■□□□ 1.17
LETM1-201ENST00000302787 RBAKQ9NYW8 714 aaPredicted RBP22.39■■□□□ 1.17
LETM1-201ENST00000302787 IQSEC2Q5JU85 1478 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 CYP26A1O43174 497 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 FGD4Q96M96 766 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 C2orf40Q9H1Z8 148 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 INPP5FQ9Y2H2 1132 aa22.39■■□□□ 1.17
LETM1-201ENST00000302787 EPHB1P54762 984 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 STK4Q13043 487 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 CXorf38Q8TB03 319 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 WRNIP1Q96S55 665 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 MTMR4Q9NYA4 1195 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 RXRBP28702 533 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 ROR1Q01973 937 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 RHPN2Q8IUC4 686 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 ARFIP2P53365 341 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 ATP11CQ8NB49 1132 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 MRPL4Q9BYD3 311 aaKnown RBP22.38■■□□□ 1.17
LETM1-201ENST00000302787 YWHAHQ04917 246 aaPredicted RBP22.38■■□□□ 1.17
LETM1-201ENST00000302787 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.38■■□□□ 1.17
LETM1-201ENST00000302787 PARVAQ9NVD7 372 aa22.38■■□□□ 1.17
LETM1-201ENST00000302787 EEF1B2P24534 225 aaKnown RBP22.37■■□□□ 1.17
LETM1-201ENST00000302787 COPS2P61201 443 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 NOP14P78316 857 aaKnown RBP22.37■■□□□ 1.17
LETM1-201ENST00000302787 ZBTB24O43167 697 aaPredicted RBP22.37■■□□□ 1.17
LETM1-201ENST00000302787 KIF19Q2TAC6 998 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 CEP55Q53EZ4 464 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 AGO2Q9UKV8 859 aaKnown RBP22.37■■□□□ 1.17
LETM1-201ENST00000302787 ZNF543Q08ER8 600 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 CENPKQ9BS16 269 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 TRIM15Q9C019 465 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 SMYD3Q9H7B4 428 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 MYMKA6NI61 221 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 PARP9Q8IXQ6 854 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 STK33Q9BYT3 514 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 STOML1Q9UBI4 398 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 MKRN3Q13064 507 aaKnown RBP22.37■■□□□ 1.17
LETM1-201ENST00000302787 CCNI2Q6ZMN8 369 aaPredicted RBP22.37■■□□□ 1.17
LETM1-201ENST00000302787 ACAD11Q709F0 780 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 SP8Q8IXZ3 490 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 SLC35G2Q8TBE7 412 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 PNMA3Q9UL41 463 aa22.37■■□□□ 1.17
LETM1-201ENST00000302787 DLC1Q96QB1 1528 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 HUS1O60921 280 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 C1orf146Q5VVC0 180 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 LDHDQ86WU2 507 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 BEST2Q8NFU1 509 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 ETNK1Q9HBU6 452 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 A0A0G2JLW4 131 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 ACTN3Q08043 901 aaPredicted RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 KIAA1755Q5JYT7 1200 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 KIAA1841Q6NSI8 718 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.36■■□□□ 1.178e-7■■■■■ 60.2
LETM1-201ENST00000302787 FLT1P17948 1338 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 SPDYE2BA6NHP3 402 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 SPDYE6P0CI01 402 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 KRT10P13645 584 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 SSTR3P32745 418 aaPredicted RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 HSPA9P38646 679 aaKnown RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 PAPOLAP51003 745 aaKnown RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 CYFIP1Q7L576 1253 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 XAB2Q9HCS7 855 aaKnown RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 APEX2Q9UBZ4 518 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 STXBP3O00186 592 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 PPFIA2O75334 1257 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 DNAJC8O75937 253 aaPredicted RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 GYPCP04921 128 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 MDH1P40925 334 aaKnown RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 HEATR6Q6AI08 1181 aaKnown RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 REEP2Q9BRK0 252 aa22.36■■□□□ 1.17
LETM1-201ENST00000302787 SUDS3Q9H7L9 328 aaPredicted RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 PDS5AQ29RF7 1337 aaKnown RBP22.36■■□□□ 1.17
LETM1-201ENST00000302787 PPP1R37O75864 691 aa22.35■■□□□ 1.17
LETM1-201ENST00000302787 YWHABP31946 246 aaKnown RBP22.35■■□□□ 1.17
LETM1-201ENST00000302787 BCAR1P56945 870 aa22.35■■□□□ 1.17
LETM1-201ENST00000302787 ZNF34Q8IZ26 560 aa22.35■■□□□ 1.17
LETM1-201ENST00000302787 GCOM2Q9BZD3 368 aaPredicted RBP22.35■■□□□ 1.17
LETM1-201ENST00000302787 SUGT1Q9Y2Z0 365 aa22.35■■□□□ 1.17
LETM1-201ENST00000302787 PTPRUQ92729 1446 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms