RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 RAPGEF1Q13905 1077 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 MXD4Q14582 209 aaPredicted RBP13.05□□□□□ -0.32
TPM3-202ENST00000302206 SNRNP35Q16560 246 aaKnown RBP13.05□□□□□ -0.32
TPM3-202ENST00000302206 CBWD6Q4V339 395 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 CBWD3Q5JTY5 395 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 ZNF484Q5JVG2 852 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 CBWD5Q5RIA9 395 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 C1orf220Q5T0J3 134 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 IRF2BP2Q7Z5L9 587 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 DPP9Q86TI2 863 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 GPD1LQ8N335 351 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 JAKMIP2Q96AA8 810 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 TMEM143Q96AN5 459 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 MAML3Q96JK9 1138 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 SPAG5Q96R06 1193 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 WDR24Q96S15 920 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 KIFC3Q9BVG8 833 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 STK33Q9BYT3 514 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 INTS2Q9H0H0 1204 aaKnown RBP13.05□□□□□ -0.32
TPM3-202ENST00000302206 DEF6Q9H4E7 631 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 PDGFCQ9NRA1 345 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
TPM3-202ENST00000302206 FHOD1Q9Y613 1164 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 MCM3APO60318 1980 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 COL1A2P08123 1366 aa13.05□□□□□ -0.32
TPM3-202ENST00000302206 ZBTB42B2RXF5 422 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 K7ERI5 159 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
TPM3-202ENST00000302206 EXTL3O43909 919 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 ADCY3O60266 1144 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 SLU7O95391 586 aaKnown RBP13.04□□□□□ -0.32
TPM3-202ENST00000302206 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
TPM3-202ENST00000302206 ADRB2P07550 413 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 PLEKP08567 350 aaPredicted RBP13.04□□□□□ -0.32
TPM3-202ENST00000302206 TRIM49P0CI25 452 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 TRIM49CP0CI26 452 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 HOXD8P13378 290 aaPredicted RBP13.04□□□□□ -0.32
TPM3-202ENST00000302206 STAT1P42224 750 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 LIG4P49917 911 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 KLHL30Q0D2K2 578 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 EPC2Q52LR7 807 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 MORN1Q5T089 497 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 C10orf76Q5T2E6 689 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
TPM3-202ENST00000302206 IQSEC1Q6DN90 963 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 ZPBP2Q6X784 338 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 LMO3Q8TAP4 145 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 POMGNT1Q8WZA1 660 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 COPS5Q92905 334 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 TINF2Q9BSI4 451 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 C2orf40Q9H1Z8 148 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 ABHD16BQ9H3Z7 469 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 APEX2Q9UBZ4 518 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 COQ4Q9Y3A0 265 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 PCDHA13Q9Y5I0 950 aa13.04□□□□□ -0.32
TPM3-202ENST00000302206 A0A0U1RQJ8 604 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 LRRIQ4A6NIV6 560 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 DLL1O00548 723 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 ZNF263O14978 683 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 FANCGO15287 622 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 ASAP2O43150 1006 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 PPFIA4O75335 1185 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 HOXC6P09630 235 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 CCDC172P0C7W6 258 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 EN2P19622 333 aaPredicted RBP13.03□□□□□ -0.32
TPM3-202ENST00000302206 APBA1Q02410 837 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 CYP24A1Q07973 514 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 CAPSQ13938 189 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 DUSP28Q4G0W2 176 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 TDRD12Q587J7 1177 aaKnown RBP13.03□□□□□ -0.32
TPM3-202ENST00000302206 ZNF569Q5MCW4 686 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 CCDC122Q5T0U0 273 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 RDH13Q8NBN7 331 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 PLEKHO2Q8TD55 490 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 PARD3BQ8TEW8 1205 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 ATRIPQ8WXE1 791 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 PSPC1Q8WXF1 523 aaKnown RBP13.03□□□□□ -0.32
TPM3-202ENST00000302206 BICD1Q96G01 975 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 ERO1AQ96HE7 468 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 IFIH1Q9BYX4 1025 aaKnown RBP13.03□□□□□ -0.32
TPM3-202ENST00000302206 TRIOBPQ9H2D6 2365 aa13.03□□□□□ -0.32
TPM3-202ENST00000302206 CTAGE9A4FU28 777 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 ZNF233A6NK53 670 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 IGF2BP3O00425 579 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPM3-202ENST00000302206 MAGEB2O15479 319 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.33
TPM3-202ENST00000302206 LGALS2P05162 132 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 SOX5P35711 763 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 MAGEA1P43355 309 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 MXI1P50539 228 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 DLG4P78352 724 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 CLDN10P78369 228 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 POU5F1BQ06416 359 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 PPP3CAQ08209 521 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms