RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 HAPLN2Q9GZV7 340 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 ERAP1Q9NZ08 941 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 MRFAP1Q9Y605 127 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 SIP14410 1827 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 A0A087X0T9 212 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 CTAGE9A4FU28 777 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 GAS2O43903 313 aaKnown RBP24.2■■□□□ 1.46
SMAD1-201ENST00000302085 LGALS2P05162 132 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 FAM228BP0C875 321 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 SLC18A3Q16572 532 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 ERO1AQ96HE7 468 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.2■■□□□ 1.46
SMAD1-201ENST00000302085 ADAMTS1Q9UHI8 967 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 F8VZ95 297 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 PJA2O43164 708 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 EXTL3O43909 919 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 SMPD1P17405 629 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 SOX5P35711 763 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 TAF1CQ15572 869 aaPredicted RBP24.2■■□□□ 1.46
SMAD1-201ENST00000302085 MORN1Q5T089 497 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 PSPC1Q8WXF1 523 aaKnown RBP24.2■■□□□ 1.46
SMAD1-201ENST00000302085 NAPGQ99747 312 aaPredicted RBP24.2■■□□□ 1.46
SMAD1-201ENST00000302085 DAAM1Q9Y4D1 1078 aa24.2■■□□□ 1.46
SMAD1-201ENST00000302085 ZNF233A6NK53 670 aa24.19■■□□□ 1.46
SMAD1-201ENST00000302085 ECM2O94769 699 aaPredicted RBP24.19■■□□□ 1.46
SMAD1-201ENST00000302085 GFPT2O94808 682 aa24.19■■□□□ 1.46
SMAD1-201ENST00000302085 MXI1P50539 228 aa24.19■■□□□ 1.46
SMAD1-201ENST00000302085 MAP2K1Q02750 393 aaPredicted RBP24.19■■□□□ 1.46
SMAD1-201ENST00000302085 ACVR2BQ13705 512 aa24.19■■□□□ 1.46
SMAD1-201ENST00000302085 MXD4Q14582 209 aaPredicted RBP24.19■■□□□ 1.46
SMAD1-201ENST00000302085 ZBTB10Q96DT7 871 aa24.19■■□□□ 1.46
SMAD1-201ENST00000302085 ZCCHC17Q9NP64 241 aaKnown RBP24.19■■□□□ 1.46
SMAD1-201ENST00000302085 TOPORSQ9NS56 1045 aaPredicted RBP24.19■■□□□ 1.46
SMAD1-201ENST00000302085 SUCLA2Q9P2R7 463 aaPredicted RBP24.19■■□□□ 1.46
SMAD1-201ENST00000302085 TULP1O00294 542 aaPredicted RBP24.18■■□□□ 1.46
SMAD1-201ENST00000302085 SRGAP2CP0DJJ0 459 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 FERP16591 822 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 SLFN12LQ6IEE8 588 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 ARHGEF19Q8IW93 802 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 CCDC113Q9H0I3 377 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 ABHD16BQ9H3Z7 469 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 KIAA1586Q9HCI6 787 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 AGO2Q9UKV8 859 aaKnown RBP24.18■■□□□ 1.46
SMAD1-201ENST00000302085 MACROD2A1Z1Q3 448 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 ENPEPQ07075 957 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 DUSP28Q4G0W2 176 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 CDCA2Q69YH5 1023 aaPredicted RBP24.18■■□□□ 1.46
SMAD1-201ENST00000302085 SEMA4DQ92854 862 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 JPH2Q9BR39 696 aaPredicted RBP24.18■■□□□ 1.46
SMAD1-201ENST00000302085 CARD6Q9BX69 1037 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 TMEM8AQ9HCN3 771 aa24.18■■□□□ 1.46
SMAD1-201ENST00000302085 UBE2TQ9NPD8 197 aaPredicted RBP24.18■■□□□ 1.46
SMAD1-201ENST00000302085 A0A0B4J269 797 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 TTLL13PA6NNM8 815 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 KIAA0391O15091 583 aaKnown RBP24.17■■□□□ 1.46
SMAD1-201ENST00000302085 INSRRP14616 1297 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 GTF2H1P32780 548 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 EFNA5P52803 228 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 ZNF484Q5JVG2 852 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 KRT39Q6A163 491 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 IQSEC1Q6DN90 963 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 EFCAB12Q6NXP0 572 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 CRELD2Q6UXH1 353 aaPredicted RBP24.17■■□□□ 1.46
SMAD1-201ENST00000302085 IFNL1Q8IU54 200 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 C16orf70Q9BSU1 422 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 COQ4Q9Y3A0 265 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 PASKQ96RG2 1323 aa24.17■■□□□ 1.46
SMAD1-201ENST00000302085 EVI5O60447 810 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 PPFIA4O75335 1185 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 SLC10A3P09131 477 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 RFX1P22670 979 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 NLRP11P59045 1033 aaKnown RBP24.16■■□□□ 1.46
SMAD1-201ENST00000302085 NCBP1Q09161 790 aaKnown RBP24.16■■□□□ 1.46
SMAD1-201ENST00000302085 MAP2K5Q13163 448 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 ARHGAP44Q17R89 818 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 RNF149Q8NC42 400 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 SECISBP2LQ93073 1101 aaKnown RBP24.16■■□□□ 1.46
SMAD1-201ENST00000302085 SLC5A4Q9NY91 659 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 ZHX1Q9UKY1 873 aaPredicted RBP24.16■■□□□ 1.46
SMAD1-201ENST00000302085 FOXN3O00409 490 aaPredicted RBP24.16■■□□□ 1.46
SMAD1-201ENST00000302085 MSCO60682 206 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 C22orf31O95567 290 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 GJB1P08034 283 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 ZNF286BP0CG31 522 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 ACOT2P49753 483 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 C17orf99Q6UX52 265 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 RHPN2Q8IUC4 686 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 MSL3Q8N5Y2 521 aaKnown RBP24.16■■□□□ 1.46
SMAD1-201ENST00000302085 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.16■■□□□ 1.46
SMAD1-201ENST00000302085 SALL4Q9UJQ4 1053 aa24.16■■□□□ 1.46
SMAD1-201ENST00000302085 V9GYY5 206 aaPredicted RBP24.16■■□□□ 1.46
SMAD1-201ENST00000302085 DLATP10515 647 aaKnown RBP24.15■■□□□ 1.46
SMAD1-201ENST00000302085 WNT7BP56706 349 aa24.15■■□□□ 1.46
SMAD1-201ENST00000302085 PSMD6Q15008 389 aa24.15■■□□□ 1.46
SMAD1-201ENST00000302085 ZBTB41Q5SVQ8 909 aa24.15■■□□□ 1.46
SMAD1-201ENST00000302085 SV2AQ7L0J3 742 aa24.15■■□□□ 1.46
SMAD1-201ENST00000302085 USP37Q86T82 979 aa24.15■■□□□ 1.46
SMAD1-201ENST00000302085 ZNF710Q8N1W2 664 aa24.15■■□□□ 1.46
SMAD1-201ENST00000302085 ZNF516Q92618 1163 aa24.15■■□□□ 1.46
SMAD1-201ENST00000302085 CDC23Q9UJX2 597 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms