RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 BRD8Q9H0E9 1235 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 DONSONQ9NYP3 566 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 PTPRTO14522 1441 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 DLGAP3O95886 979 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 SEC24CP53992 1094 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 DYNLL1P63167 89 aaKnown RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 CHRNDQ07001 517 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 ABCB5Q2M3G0 1257 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 MTERF2Q49AM1 385 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 ARL6IP4Q66PJ3 421 aaKnown RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
SCN3B-201ENST00000299333 CCDC80Q76M96 950 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 ANKRD7Q92527 254 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 CYP26B1Q9NR63 512 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 ZSWIM5Q9P217 1185 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 PITPNM2Q9BZ72 1349 aa15.73■□□□□ 0.11
SCN3B-201ENST00000299333 KCNA2P16389 499 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 UNC13DQ70J99 1090 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 CDH24Q86UP0 819 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 DDHD1Q8NEL9 900 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 BHMT2Q9H2M3 363 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 UNC45AQ9H3U1 944 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 ORC4O43929 436 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 TBC1D4O60343 1298 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 OCM2P0CE71 109 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 OCMP0CE72 109 aaPredicted RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 KCNH2Q12809 1159 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 ITGB3BPQ13352 177 aaPredicted RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 STAT4Q14765 748 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 RBBP7Q16576 425 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 STAG2Q8N3U4 1231 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 RANBP17Q9H2T7 1088 aaKnown RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 PCSK1NQ9UHG2 260 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 TSR3Q9UJK0 312 aaKnown RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 DHX34Q14147 1143 aaKnown RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 CCDC142Q17RM4 750 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 MIS18BP1Q6P0N0 1132 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 CASS4Q9NQ75 786 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 FAM95CA0A1B0GW59 222 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 ANGPT2O15123 496 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 EFCAB14O75071 495 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 TCN1P20061 433 aaPredicted RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 HOXA7P31268 230 aaPredicted RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 FMR1NBQ8N0W7 255 aaPredicted RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 ACAP3Q96P50 834 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 MSTO1Q9BUK6 570 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 RNF139Q8WU17 664 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 PPP1R16BQ96T49 567 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 EPAS1Q99814 870 aa15.72■□□□□ 0.11
SCN3B-201ENST00000299333 PUS7LQ9H0K6 701 aaKnown RBP15.72■□□□□ 0.11
SCN3B-201ENST00000299333 S100A9P06702 114 aaKnown RBP15.71■□□□□ 0.11
SCN3B-201ENST00000299333 SOX11P35716 441 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 GCLMP48507 274 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 IRAK1P51617 712 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 ARPP19P56211 112 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 GCOM2Q9BZD3 368 aaPredicted RBP15.71■□□□□ 0.11
SCN3B-201ENST00000299333 EXOSC4Q9NPD3 245 aaKnown RBP15.71■□□□□ 0.11
SCN3B-201ENST00000299333 CCT8L1PA6NM43 557 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 FTLP02792 175 aaPredicted RBP15.71■□□□□ 0.11
SCN3B-201ENST00000299333 RUNX1T1Q06455 604 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 CNBD2Q96M20 576 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 ASNSD1Q9NWL6 643 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.71■□□□□ 0.11
SCN3B-201ENST00000299333 BLOC1S6Q9UL45 172 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 CLK1P49759 484 aaKnown RBP15.71■□□□□ 0.11
SCN3B-201ENST00000299333 HIF1AQ16665 826 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 USP17L2Q6R6M4 530 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 PPHLN1Q8NEY8 458 aaKnown RBP15.71■□□□□ 0.11
SCN3B-201ENST00000299333 RAD21L1Q9H4I0 556 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 COPRSQ9NQ92 184 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 ITM2BQ9Y287 266 aa15.71■□□□□ 0.11
SCN3B-201ENST00000299333 LRRIQ3A6PVS8 624 aaPredicted RBP15.71■□□□□ 0.1
SCN3B-201ENST00000299333 TTLL1O95922 423 aa15.71■□□□□ 0.1
SCN3B-201ENST00000299333 GYS1P13807 737 aa15.71■□□□□ 0.1
SCN3B-201ENST00000299333 VHLP40337 213 aa15.71■□□□□ 0.1
SCN3B-201ENST00000299333 TBL3Q12788 808 aaKnown RBP15.71■□□□□ 0.1
SCN3B-201ENST00000299333 MXD4Q14582 209 aaPredicted RBP15.71■□□□□ 0.1
SCN3B-201ENST00000299333 CRYMQ14894 314 aa15.71■□□□□ 0.1
SCN3B-201ENST00000299333 LRIG3Q6UXM1 1119 aa15.71■□□□□ 0.1
SCN3B-201ENST00000299333 RHPN2Q8IUC4 686 aa15.71■□□□□ 0.1
SCN3B-201ENST00000299333 FAM210AQ96ND0 272 aa15.71■□□□□ 0.1
SCN3B-201ENST00000299333 LIMA1Q9UHB6 759 aaKnown RBP15.71■□□□□ 0.1
SCN3B-201ENST00000299333 B2RBV5 119 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 TBC1D9BQ66K14 1250 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 C4orf33Q8N1A6 199 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 ZBTB38Q8NAP3 1195 aaPredicted RBP15.7■□□□□ 0.1
SCN3B-201ENST00000299333 C20orf96Q9NUD7 363 aaPredicted RBP15.7■□□□□ 0.1
SCN3B-201ENST00000299333 NR3C1P04150 777 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 ARSEP51690 589 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 CYB5D1Q6P9G0 228 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 RRM2BQ7LG56 351 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 KCNK16Q96T55 309 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 TRIM51Q9BSJ1 452 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 PDP2Q9P2J9 529 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 UBE4BO95155 1302 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 TMCC1O94876 653 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 PLIN5Q00G26 463 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 ROR1Q01973 937 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 NLRP9Q7RTR0 991 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 RUBCNQ92622 972 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms