RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 BRDTQ58F21 947 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 WDR44Q5JSH3 913 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 FAM102BQ5T8I3 360 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 RINT1Q6NUQ1 792 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 C1orf186Q6ZWK4 172 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 PLPPR4Q7Z2D5 763 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 METTL13Q8N6R0 699 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 LINC01465Q8N7H1 131 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 C7orf31Q8N865 590 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 PCSK9Q8NBP7 692 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 CNNM3Q8NE01 707 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 FAM167AQ96KS9 214 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 PCMTD1Q96MG8 357 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 GAS2L1Q99501 681 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 PPP1R12CQ9BZL4 782 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 GZF1Q9H116 711 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 C11orf49Q9H6J7 331 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 SUGCTQ9HAC7 445 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 ATP6V0A4Q9HBG4 840 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 GTF2IRD1Q9UHL9 959 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 TUBE1Q9UJT0 475 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 GDF2Q9UK05 429 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 GDAQ9Y2T3 454 aa7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 MYH9P35579 1960 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-201ENST00000299185 TRIP12Q14669 1992 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 ESPNB1AK53 854 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 ZEB2O60315 1214 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 HBP1O60381 514 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 SLFN14P0C7P3 912 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 GLRA2P23416 452 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 KLRC1P26715 233 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 NMT1P30419 496 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 HOXC8P31273 242 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 CASP5P51878 434 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 TBC1D8BQ0IIM8 1120 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 CAPSQ13938 189 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 GIT2Q14161 759 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 POSTNQ15063 836 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 TCTN1Q2MV58 587 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 TRIM71Q2Q1W2 868 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 MTHFD1LQ6UB35 978 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 FAM126BQ8IXS8 530 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 CEP57L1Q8IYX8 460 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 SYT2Q8N9I0 419 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 IQUBQ8NA54 791 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 ARRDC4Q8NCT1 418 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 DNAJB3Q8WWF6 145 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 DNAJC19Q96DA6 116 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 NLRP4Q96MN2 994 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 GLT1D1Q96MS3 346 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 NACC1Q96RE7 527 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 NIFKQ9BYG3 293 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 TRIM9Q9C026 710 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 NUCKS1Q9H1E3 243 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 NUP62CLQ9H1M0 184 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 DHX33Q9H6R0 707 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 CYLDQ9NQC7 956 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 PRDM5Q9NQX1 630 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 ANKEF1Q9NU02 776 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 DBR1Q9UK59 544 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 MAN1B1Q9UKM7 699 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 DNM3Q9UQ16 869 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 GINS2Q9Y248 185 aa7.19□□□□□ -1.26
DEPDC4-201ENST00000299185 TANC1Q9C0D5 1861 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 KIAA0100Q14667 2235 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 MBLAC1A4D2B0 266 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 LRRIQ4A6NIV6 560 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 TISP43B9A030 160 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 K7ENM7 598 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 ARVCFO00192 962 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 SLC16A4O15374 487 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 TRAK2O60296 914 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 TBCAO75347 108 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 MAFO75444 373 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 FAM13AO94988 1023 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 MBD3O95983 291 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 MYBP10242 640 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 COL8A1P27658 744 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 ADAM17P78536 824 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 TLE2Q04725 743 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 POU4F2Q12837 409 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 PTGISQ16647 500 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 KIZQ2M2Z5 673 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 ZNF484Q5JVG2 852 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 EFCAB12Q6NXP0 572 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 NFRKBQ6P4R8 1299 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 SV2BQ7L1I2 683 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 UBE2Q1Q7Z7E8 422 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 CDR2LQ86X02 465 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 RHPN2Q8IUC4 686 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 C7orf61Q8IZ16 206 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 KIAA0319LQ8IZA0 1049 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 SLC43A3Q8NBI5 491 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 KIAA0895Q8NCT3 520 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 TMEM40Q8WWA1 233 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 SCLT1Q96NL6 688 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 OSMRQ99650 979 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 KATNAL1Q9BW62 490 aa7.18□□□□□ -1.26
DEPDC4-201ENST00000299185 NT5C3AQ9H0P0 336 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms