RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CAVIN2O95810 425 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 SLFN14P0C7P3 912 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 CCDC192P0DO97 292 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 ITGB3BPQ13352 177 aaPredicted RBP23.29■■□□□ 1.32
SMCO4-201ENST00000298966 CAMK4Q16566 473 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 KIZQ2M2Z5 673 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 HAUS3Q68CZ6 603 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 CABP7Q86V35 215 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 ERMNQ8TAM6 284 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 CASD1Q96PB1 797 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 PPP1R16BQ96T49 567 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 RIT2Q99578 217 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 DISC1Q9NRI5 854 aa23.29■■□□□ 1.32
SMCO4-201ENST00000298966 MSH4O15457 936 aa23.28■■□□□ 1.32
SMCO4-201ENST00000298966 MYL1P05976 194 aa23.28■■□□□ 1.32
SMCO4-201ENST00000298966 DSC3Q14574 896 aa23.28■■□□□ 1.32
SMCO4-201ENST00000298966 LRRC55Q6ZSA7 311 aa23.28■■□□□ 1.32
SMCO4-201ENST00000298966 USP49Q70CQ1 688 aa23.28■■□□□ 1.32
SMCO4-201ENST00000298966 FRMD5Q7Z6J6 570 aa23.28■■□□□ 1.32
SMCO4-201ENST00000298966 MRPL43Q8N983 215 aaKnown RBP23.28■■□□□ 1.32
SMCO4-201ENST00000298966 TDRD5Q8NAT2 981 aaKnown RBP23.28■■□□□ 1.32
SMCO4-201ENST00000298966 RASSF8Q8NHQ8 419 aa23.28■■□□□ 1.32
SMCO4-201ENST00000298966 SLC5A5Q92911 643 aa23.28■■□□□ 1.32
SMCO4-201ENST00000298966 MYH9P35579 1960 aaKnown RBP23.27■■□□□ 1.32
SMCO4-201ENST00000298966 DDX39AO00148 427 aaKnown RBP23.27■■□□□ 1.32
SMCO4-201ENST00000298966 CA8P35219 290 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 DEKP35659 375 aaKnown RBP23.27■■□□□ 1.32
SMCO4-201ENST00000298966 PBX3P40426 434 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 CLCN5P51795 746 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 BMS1Q14692 1282 aaKnown RBP23.27■■□□□ 1.32
SMCO4-201ENST00000298966 PDXDC2PQ6P474 469 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 SASS6Q6UVJ0 657 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 ABHD15Q6UXT9 468 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 ZDHHC14Q8IZN3 488 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 NT5C3AQ9H0P0 336 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 SMOC2Q9H3U7 446 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 GRPEL1Q9HAV7 217 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 ZNF302Q9NR11 478 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 STK17AQ9UEE5 414 aa23.27■■□□□ 1.32
SMCO4-201ENST00000298966 C2orf71A6NGG8 1288 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 ACTN4O43707 911 aaKnown RBP23.26■■□□□ 1.31
SMCO4-201ENST00000298966 CLASP2O75122 1294 aaKnown RBP23.26■■□□□ 1.31
SMCO4-201ENST00000298966 ASGR2P07307 311 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 ZSCAN20P17040 1043 aaPredicted RBP23.26■■□□□ 1.31
SMCO4-201ENST00000298966 STAT6P42226 847 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 ID4P47928 161 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 ZRSR1Q15695 479 aaKnown RBP23.26■■□□□ 1.31
SMCO4-201ENST00000298966 E2F4Q16254 413 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 LONRF3Q496Y0 759 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 RRAGBQ5VZM2 374 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 CCDC60Q8IWA6 550 aaPredicted RBP23.26■■□□□ 1.31
SMCO4-201ENST00000298966 PLCD3Q8N3E9 789 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 CDK5RAP3Q96JB5 506 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 RNF19AQ9NV58 838 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 MYO15AQ9UKN7 3530 aa23.26■■□□□ 1.31
SMCO4-201ENST00000298966 CCNE2O96020 404 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 VTNP04004 478 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 MUTP22033 750 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 PPP2R5CQ13362 524 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 HYIQ5T013 277 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 RARS2Q5T160 578 aaKnown RBP23.25■■□□□ 1.31
SMCO4-201ENST00000298966 MIS18BP1Q6P0N0 1132 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 CKAP2LQ8IYA6 745 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 ADSSL1Q8N142 457 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 SLC39A11Q8N1S5 342 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 METTL13Q8N6R0 699 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 DHX58Q96C10 678 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 ZNF577Q9BSK1 485 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 TEKT3Q9BXF9 490 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 TBC1D22BQ9NU19 505 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 KIAA1468Q9P260 1216 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 LIMD1Q9UGP4 676 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 SERTAD1Q9UHV2 236 aa23.25■■□□□ 1.31
SMCO4-201ENST00000298966 DBR1Q9UK59 544 aaKnown RBP23.25■■□□□ 1.31
SMCO4-201ENST00000298966 GPR32O75388 356 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 C22orf31O95567 290 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 POSTNQ15063 836 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 ATAT1Q5SQI0 421 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 LRCH2Q5VUJ6 765 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 KIAA1841Q6NSI8 718 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 SWSAP1Q6NVH7 229 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 PDILTQ8N807 584 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 RNF169Q8NCN4 708 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 FLCNQ8NFG4 579 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 LRRC27Q9C0I9 530 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 DZANK1Q9NVP4 752 aa23.24■■□□□ 1.31
SMCO4-201ENST00000298966 CACNA1AO00555 2505 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 ZBTB42B2RXF5 422 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 IPO5O00410 1097 aaKnown RBP23.23■■□□□ 1.31
SMCO4-201ENST00000298966 GAS7O60861 476 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 PSMD10O75832 226 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 SMC2O95347 1197 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 WEE2P0C1S8 567 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 TYRO3Q06418 890 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 SPIRE1Q08AE8 756 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 ECHDC2Q86YB7 292 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 SNX29Q8TEQ0 813 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 BBXQ8WY36 941 aaPredicted RBP23.23■■□□□ 1.31
SMCO4-201ENST00000298966 TCEAL9Q9UHQ7 104 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 VAV3Q9UKW4 847 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms