RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 STXBP4Q6ZWJ1 553 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ZC3H18Q86VM9 953 aaKnown RBP12.22□□□□□ -0.45
TRUB1-201ENST00000298746 SLFN12Q8IYM2 578 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 VPS52Q8N1B4 723 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ZNF526Q8TF50 670 aaPredicted RBP12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ZSWIM1Q9BR11 485 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
TRUB1-201ENST00000298746 EPB41L4BQ9H329 900 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 JMJD4Q9H9V9 463 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
TRUB1-201ENST00000298746 DPPA5A6NC42 116 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 MARSP56192 900 aaKnown RBP12.21□□□□□ -0.45
TRUB1-201ENST00000298746 RWDD2BP57060 319 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 POU5F1Q01860 360 aaKnown RBP12.21□□□□□ -0.45
TRUB1-201ENST00000298746 GRIK3Q13003 919 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 BLMHQ13867 455 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 MFSD14BQ5SR56 506 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 ODR4Q5SWX8 454 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 TRMT10CQ7L0Y3 403 aaKnown RBP12.21□□□□□ -0.45
TRUB1-201ENST00000298746 PPFIBP2Q8ND30 876 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 DTX3LQ8TDB6 740 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 DNAJC9Q8WXX5 260 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 MYLK2Q9H1R3 596 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 COG5Q9UP83 839 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 EXOC1LA0A1B0GW35 172 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 CBX6O95503 412 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 TTLL1O95922 423 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 AKR1B1P15121 316 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 BRD2P25440 801 aaKnown RBP12.21□□□□□ -0.45
TRUB1-201ENST00000298746 ANXA13P27216 316 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 EPHB2P29323 1055 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 GCLMP48507 274 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 SLC13A5Q86YT5 568 aaPredicted RBP12.21□□□□□ -0.45
TRUB1-201ENST00000298746 C4orf33Q8N1A6 199 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 NUP85Q9BW27 656 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 APEX2Q9UBZ4 518 aa12.21□□□□□ -0.45
TRUB1-201ENST00000298746 NKX1-2Q9UD57 310 aaPredicted RBP12.21□□□□□ -0.45
TRUB1-201ENST00000298746 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.21□□□□□ -0.45
TRUB1-201ENST00000298746 hCG_1984214I3L0E3 225 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 PAPOLAP51003 745 aaKnown RBP12.21□□□□□ -0.46
TRUB1-201ENST00000298746 ITGA8P53708 1063 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 SPDYCQ5MJ68 293 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 TPTE2Q6XPS3 522 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 ZNF713Q8N859 430 aaPredicted RBP12.21□□□□□ -0.46
TRUB1-201ENST00000298746 ZNF564Q8TBZ8 553 aaPredicted RBP12.21□□□□□ -0.46
TRUB1-201ENST00000298746 CKAP2Q8WWK9 683 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 SERPINB12Q96P63 405 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 NAP1L4Q99733 375 aaKnown RBP12.21□□□□□ -0.46
TRUB1-201ENST00000298746 RIOX1Q9H6W3 641 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 METTL5Q9NRN9 209 aaKnown RBP12.21□□□□□ -0.46
TRUB1-201ENST00000298746 IRAK4Q9NWZ3 460 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 PKD2L1Q9P0L9 805 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 ZMYND8Q9ULU4 1186 aaPredicted RBP12.21□□□□□ -0.46
TRUB1-201ENST00000298746 TRAF3IP3Q9Y228 551 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 USTQ9Y2C2 406 aa12.21□□□□□ -0.46
TRUB1-201ENST00000298746 G3V3G9 751 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 O00370 1275 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 ENTPD5O75356 428 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 UNC5CO95185 931 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 KRT5P13647 590 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 VCAM1P19320 739 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 CHKAP35790 457 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 PLCB3Q01970 1234 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 RCN2Q14257 317 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 RRP1BQ14684 758 aaKnown RBP12.2□□□□□ -0.46
TRUB1-201ENST00000298746 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
TRUB1-201ENST00000298746 DCAF8Q5TAQ9 597 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 SEC14L1Q92503 715 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 RNPEPL1Q9HAU8 725 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 ACP6Q9NPH0 428 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 ARHGEF3Q9NR81 526 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 SCOCQ9UIL1 159 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 KCNG1Q9UIX4 513 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 CALB2P22676 271 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 HOXA13P31271 388 aaPredicted RBP12.2□□□□□ -0.46
TRUB1-201ENST00000298746 ITPK1Q13572 414 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 DDB1Q16531 1140 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 CBWD6Q4V339 395 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 CBWD3Q5JTY5 395 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 CBWD5Q5RIA9 395 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 FYB2Q5VWT5 728 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 ECHDC2Q86YB7 292 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 CPNE8Q86YQ8 564 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 TAB3Q8N5C8 712 aaPredicted RBP12.2□□□□□ -0.46
TRUB1-201ENST00000298746 TBC1D16Q8TBP0 767 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 MTMR4Q9NYA4 1195 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 ZBTB5O15062 677 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 DRG2P55039 364 aaKnown RBP12.2□□□□□ -0.46
TRUB1-201ENST00000298746 ARHGAP4P98171 946 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 C16orf86Q6ZW13 317 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 SLC30A5Q8TAD4 765 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 SPOCK2Q92563 424 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 CCDC127Q96BQ5 260 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 GBP5Q96PP8 586 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms