RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 PPP3CAQ08209 521 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 GPS2Q13227 327 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 SNRNP35Q16560 246 aaKnown RBP28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 GLE1Q53GS7 698 aaKnown RBP28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 C1orf220Q5T0J3 134 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 TREML2Q5T2D2 321 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 RDH13Q8NBN7 331 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 OLIG1Q8TAK6 271 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 ABCB6Q9NP58 842 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 XPNPEP1Q9NQW7 623 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 PPME1Q9Y570 386 aa28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 MAFBQ9Y5Q3 323 aaPredicted RBP28.62■■■□□ 2.17
PHOX2A-201ENST00000298231 MYH9P35579 1960 aaKnown RBP28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 DOCK5Q9H7D0 1870 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 TISP43B9A030 160 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 TMEM253P0C7T8 217 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 CNGA1P29973 690 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 BSNDQ8WZ55 320 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 MPHOSPH6Q99547 160 aaKnown RBP28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 SH2D3AQ9BRG2 576 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 BEGAINQ9BUH8 593 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 ACBD3Q9H3P7 528 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 ARHGAP28Q9P2N2 729 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 CA12O43570 354 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 DLG4P78352 724 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 C2orf54Q08AI8 447 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 SNAPC2Q13487 334 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 PHLDB3Q6NSJ2 640 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 LRRC57Q8N9N7 239 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 LNX1Q8TBB1 728 aaPredicted RBP28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 SPATC1LQ9H0A9 340 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 ZNF302Q9NR11 478 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 COQ4Q9Y3A0 265 aa28.61■■■□□ 2.17
PHOX2A-201ENST00000298231 NCK2O43639 380 aa28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 OATP04181 439 aa28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 ADRB2P07550 413 aa28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 IRX3P78415 501 aaPredicted RBP28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 U2AF1L4Q8WU68 220 aaKnown RBP28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 TAF4BQ92750 862 aa28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 KIAA1586Q9HCI6 787 aa28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 TMEM8AQ9HCN3 771 aa28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 SYNGAP1Q96PV0 1343 aa28.6■■■□□ 2.17
PHOX2A-201ENST00000298231 IGKV6D-21A0A0A0MT36 114 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 SLC25A27O95847 323 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 ADSSP30520 456 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 EMC2Q15006 297 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 KRT39Q6A163 491 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 SLFN11Q7Z7L1 901 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 PBKQ96KB5 322 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 MFSD14AQ96MC6 490 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 TMEM117Q9H0C3 514 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 POLR3FQ9H1D9 316 aaPredicted RBP28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 VIPAS39Q9H9C1 493 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 SAGE1Q9NXZ1 904 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 BTBD7Q9P203 1132 aa28.59■■■□□ 2.17
PHOX2A-201ENST00000298231 CETPP11597 493 aa28.58■■■□□ 2.17
PHOX2A-201ENST00000298231 GCLMP48507 274 aa28.58■■■□□ 2.17
PHOX2A-201ENST00000298231 RPS6KA1Q15418 735 aa28.58■■■□□ 2.17
PHOX2A-201ENST00000298231 TPCN2Q8NHX9 752 aa28.58■■■□□ 2.17
PHOX2A-201ENST00000298231 UBE2Q2Q8WVN8 375 aa28.58■■■□□ 2.17
PHOX2A-201ENST00000298231 BRI3BPQ8WY22 251 aa28.58■■■□□ 2.17
PHOX2A-201ENST00000298231 RFFLQ8WZ73 363 aa28.58■■■□□ 2.17
PHOX2A-201ENST00000298231 FAM81BQ96LP2 452 aa28.58■■■□□ 2.17
PHOX2A-201ENST00000298231 CCL15-CCL14A0A0B4J2E2 113 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 ANKRD63C9JTQ0 380 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 FTCDO95954 541 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 TGFB3P10600 412 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 RFC5P40937 340 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 NEDD9Q14511 834 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 CCL15Q16663 113 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 IFNL1Q8IU54 200 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 PLEKHO2Q8TD55 490 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 PARD3BQ8TEW8 1205 aa28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 NIFKQ9BYG3 293 aaKnown RBP28.58■■■□□ 2.16
PHOX2A-201ENST00000298231 KIF4AO95239 1232 aa28.57■■■□□ 2.16
PHOX2A-201ENST00000298231 TNFRSF8P28908 595 aa28.57■■■□□ 2.16
PHOX2A-201ENST00000298231 POLGP54098 1239 aaPredicted RBP28.57■■■□□ 2.16
PHOX2A-201ENST00000298231 GADL1Q6ZQY3 521 aa28.57■■■□□ 2.16
PHOX2A-201ENST00000298231 CBWD2Q8IUF1 395 aa28.57■■■□□ 2.16
PHOX2A-201ENST00000298231 GPD1LQ8N335 351 aa28.57■■■□□ 2.16
PHOX2A-201ENST00000298231 DHX33Q9H6R0 707 aaKnown RBP28.57■■■□□ 2.16
PHOX2A-201ENST00000298231 RNF186Q9NXI6 227 aa28.57■■■□□ 2.16
PHOX2A-201ENST00000298231 IGF2BP3O00425 579 aaKnown RBP eCLIP28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 HNRNPDLO14979 420 aaKnown RBP28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 TNFAIP3P21580 790 aa28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 NOP2P46087 812 aaKnown RBP28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 GPC3P51654 580 aa28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 SMC1AQ14683 1233 aaKnown RBP28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 GLYCTKQ8IVS8 523 aa28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 CTNNBL1Q8WYA6 563 aaPredicted RBP28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 PTPN18Q99952 460 aa28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 KIFC3Q9BVG8 833 aa28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 UBE2TQ9NPD8 197 aaPredicted RBP28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 AGTPBP1Q9UPW5 1226 aa28.56■■■□□ 2.16
PHOX2A-201ENST00000298231 ZC3H11AO75152 810 aaKnown RBP eCLIP28.55■■■□□ 2.16
PHOX2A-201ENST00000298231 PIGRP01833 764 aa28.55■■■□□ 2.16
PHOX2A-201ENST00000298231 UBA1P22314 1058 aaKnown RBP28.55■■■□□ 2.16
PHOX2A-201ENST00000298231 NAMPTP43490 491 aa28.55■■■□□ 2.16
PHOX2A-201ENST00000298231 GALCP54803 685 aa28.55■■■□□ 2.16
PHOX2A-201ENST00000298231 CNTN2Q02246 1040 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms