RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 A0A1W2PQC6 194 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 ABLIM1O14639 778 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 KIAA0391O15091 583 aaKnown RBP26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 PROZP22891 400 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 PPP2R3AQ06190 1150 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 KIZQ2M2Z5 673 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 SPECC1LQ69YQ0 1117 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 TMC6Q7Z403 805 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 SLC35C1Q96A29 364 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 PRIMPOLQ96LW4 560 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 GLT1D1Q96MS3 346 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 CDHR5Q9HBB8 845 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 PHF24Q9UPV7 400 aa26.89■■□□□ 1.89
GTF2A1-201ENST00000298173 TOM1L1O75674 476 aa26.88■■□□□ 1.89
GTF2A1-201ENST00000298173 CCL5P13501 91 aa26.88■■□□□ 1.89
GTF2A1-201ENST00000298173 TMEM62Q0P6H9 643 aa26.88■■□□□ 1.89
GTF2A1-201ENST00000298173 RPAINQ86UA6 219 aa26.88■■□□□ 1.89
GTF2A1-201ENST00000298173 SERINC5Q86VE9 423 aa26.88■■□□□ 1.89
GTF2A1-201ENST00000298173 RDH13Q8NBN7 331 aa26.88■■□□□ 1.89
GTF2A1-201ENST00000298173 ITIH6Q6UXX5 1313 aa26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 CSDE1O75534 798 aaKnown RBP26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 KCNH2Q12809 1159 aa26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 TBX2Q13207 712 aaPredicted RBP26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 PRPF4BQ13523 1007 aaKnown RBP26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 FAM47CQ5HY64 1035 aa26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 GPD1LQ8N335 351 aa26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 SLC43A3Q8NBI5 491 aa26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 SAAL1Q96ER3 474 aa26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 ERGIC2Q96RQ1 377 aa26.87■■□□□ 1.89
GTF2A1-201ENST00000298173 GOLGA8IPA6NC78 632 aa26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 GOLGA8JA6NMD2 632 aa26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 B4GALT5O43286 388 aa26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 SNRNP35Q16560 246 aaKnown RBP26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 INTS8Q75QN2 995 aaKnown RBP26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 CBWD2Q8IUF1 395 aa26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 MFSD14AQ96MC6 490 aa26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 GCOM2Q9BZD3 368 aaPredicted RBP26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 AGO2Q9UKV8 859 aaKnown RBP26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 OGDHLQ9ULD0 1010 aa26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 TNFSF13BQ9Y275 285 aa26.86■■□□□ 1.89
GTF2A1-201ENST00000298173 A0A1W2PQ45 241 aaPredicted RBP26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 A0A1W2PQY0 241 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 EXTL3O43909 919 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 ADRB2P07550 413 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 LBX1P52954 281 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 BFSP1Q12934 665 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 FBXO46Q6PJ61 603 aaPredicted RBP26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 VTI1AQ96AJ9 217 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 DEFB118Q96PH6 123 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 RNF208Q9H0X6 261 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 KIAA1586Q9HCI6 787 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 GOLGA6L6A8MZA4 724 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 PES1O00541 588 aaKnown RBP26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 CLDN3O15551 220 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 DARSP14868 501 aaKnown RBP26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 MCL1Q07820 350 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 FKBP15Q5T1M5 1219 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 ATF7IP2Q5U623 682 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 CRELD2Q6UXH1 353 aaPredicted RBP26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 CCDC186Q7Z3E2 898 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 WNT8BQ93098 351 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 CNTNAP2Q9UHC6 1331 aa26.85■■□□□ 1.89
GTF2A1-201ENST00000298173 DNM1LO00429 736 aa26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 FAM189A1O60320 539 aa26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 LDHAP00338 332 aaKnown RBP26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 EIF4BP23588 611 aaKnown RBP26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 CRYBB1P53674 252 aaPredicted RBP26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 ENPEPQ07075 957 aa26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 PCBP1Q15365 356 aaKnown RBP eCLIP26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 PTGISQ16647 500 aa26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 PLEKHO2Q8TD55 490 aa26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 SCLT1Q96NL6 688 aa26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 OSMRQ99650 979 aa26.84■■□□□ 1.89
GTF2A1-201ENST00000298173 AFPP02771 609 aaKnown RBP26.83■■□□□ 1.89
GTF2A1-201ENST00000298173 RPLP2P05387 115 aaKnown RBP26.83■■□□□ 1.89
GTF2A1-201ENST00000298173 MPZL3Q6UWV2 235 aa26.83■■□□□ 1.89
GTF2A1-201ENST00000298173 CCDC155Q8N6L0 562 aa26.83■■□□□ 1.89
GTF2A1-201ENST00000298173 MSTO1Q9BUK6 570 aa26.83■■□□□ 1.89
GTF2A1-201ENST00000298173 ANKFY1Q9P2R3 1169 aa26.83■■□□□ 1.89
GTF2A1-201ENST00000298173 KBTBD13C9JR72 458 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 TSPAN1O60635 241 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 ARF4P18085 180 aaPredicted RBP26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 CTCFP49711 727 aaPredicted RBP26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 KCNMA1Q12791 1236 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 PKN2Q16513 984 aaKnown RBP26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 C1orf220Q5T0J3 134 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 TMEM40Q8WWA1 233 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 ZNF333Q96JL9 665 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 FAM213AQ9BRX8 229 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 CELF4Q9BZC1 486 aaKnown RBP26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 STARD7Q9NQZ5 370 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 GINS2Q9Y248 185 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 SIK3Q9Y2K2 1263 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 A0A1B0GUA9 196 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 ZNF233A6NK53 670 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 MYCP01106 439 aaPredicted RBP26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 HSPA1AP0DMV8 641 aaKnown RBP26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 HSPA1BP0DMV9 641 aaKnown RBP26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 KRT13P13646 458 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 VAMP7P51809 220 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms