RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 SPTLC3Q9NUV7 552 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 PRR12Q9ULL5 1215 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 SNX9Q9Y5X1 595 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 HBP1O60381 514 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 EYA4O95677 639 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 OAS2P29728 719 aaKnown RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 INPP1P49441 399 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 ATP1A2P50993 1020 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 HSD17B4P51659 736 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 GNGT1P63211 74 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 PRAMEP78395 509 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 FOXD4Q12950 439 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 KIF19Q2TAC6 998 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 SYTL3Q4VX76 610 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 PHLDB3Q6NSJ2 640 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 PCSK9Q8NBP7 692 aaKnown RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 OXER1Q8TDS5 423 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 EPB41L5Q9HCM4 733 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CEP72Q9P209 647 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 ATP8A1Q9Y2Q0 1164 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 SPHKAPQ2M3C7 1700 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 EXOC1LA0A1B0GW35 172 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 UBA6A0AVT1 1052 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 F5H423 210 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 KIF3CO14782 793 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 MYBL1P10243 752 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CDC25BP30305 580 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 DR1Q01658 176 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 APBA1Q02410 837 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 EMC2Q15006 297 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 PTPN21Q16825 1174 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 ANKS3Q6ZW76 656 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 ERO1BQ86YB8 467 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 TMEM169Q96HH4 297 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 EPAS1Q99814 870 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CENPKQ9BS16 269 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 DIS3Q9Y2L1 958 aaKnown RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 RFX7Q2KHR2 1363 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CFAP69A5D8W1 941 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 NTSR2O95665 410 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CXCR5P32302 372 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 OCRLQ01968 901 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 NR1H3Q13133 447 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 MEI1Q5TIA1 1274 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 LZICQ8WZA0 190 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 Q9H521 79 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 PTPRMP28827 1452 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 FAM95CA0A1B0GW59 222 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 H7C4K7 107 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 GPR182O15218 404 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 IGSF3O75054 1194 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 ZRANB2O95218 330 aaKnown RBP eCLIP7.36□□□□□ -1.237e-6■■■■■ 37.3
GAPVD1-202ENST00000297933 ANP32DO95626 131 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 ZFXP17010 805 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 KCNH2Q12809 1159 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 PKP1Q13835 747 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 LBRQ14739 615 aaKnown RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 TAF11Q15544 211 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 TRIM72Q6ZMU5 477 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CDKL3Q8IVW4 592 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 MB21D2Q8IYB1 491 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 SMAP1Q8IYB5 467 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 TEKT4Q8WW24 435 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 COG4Q9H9E3 785 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 STARD7Q9NQZ5 370 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CD163L1Q9NR16 1453 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 TRPM1Q7Z4N2 1603 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 RNF17Q9BXT8 1623 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 POLRMTO00411 1230 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 HOXA2O43364 376 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 KRT7P08729 469 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 ATP6V1E1P36543 226 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 ARL4CP56559 192 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 TPI1P60174 286 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 C2orf54Q08AI8 447 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 SFSWAPQ12872 951 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 CCDC157Q569K6 752 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 ANKRD40Q6AI12 368 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 ATG4CQ96DT6 458 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 INTS9Q9NV88 658 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 DDX56Q9NY93 547 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 TBK1Q9UHD2 729 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 CPA4Q9UI42 421 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 G3BP2Q9UN86 482 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 LAMC1P11047 1609 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 MYO1DO94832 1006 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 WASHC5Q12768 1159 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 ARHGEF7Q14155 803 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 PAN2Q504Q3 1202 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 ARMC6Q6NXE6 501 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 NOTUMQ6P988 496 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 C11orf57Q6ZUT1 292 aaPredicted RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 C16orf86Q6ZW13 317 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 RASSF3Q86WH2 238 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 TRMT2AQ8IZ69 625 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 NUP85Q9BW27 656 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 HEMGNQ9BXL5 484 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 RNF14Q9UBS8 474 aa7.35□□□□□ -1.23
GAPVD1-202ENST00000297933 SUN2Q9UH99 717 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms