RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 FLOT1O75955 427 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 SLITRK3O94933 977 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 EYA4O95677 639 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 MMEP08473 750 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 H2AFZP0C0S5 128 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 CHN1P15882 459 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 KCNJ2P63252 427 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 DHX9Q08211 1270 aaKnown RBP16.79■□□□□ 0.28
UBAP1-201ENST00000297661 ARHGAP44Q17R89 818 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 MOXD1Q6UVY6 613 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 H2AFVQ71UI9 128 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 PIGWQ7Z7B1 504 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 CSRNP1Q96S65 589 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 IGSF9BQ9UPX0 1349 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 IGLV3-22A0A075B6J6 115 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 F8VZ95 297 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 KRIT1O00522 736 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 ALADP13716 330 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
UBAP1-201ENST00000297661 HOXA7P31268 230 aaPredicted RBP16.78■□□□□ 0.28
UBAP1-201ENST00000297661 GMPSP49915 693 aaPredicted RBP16.78■□□□□ 0.28
UBAP1-201ENST00000297661 GALCP54803 685 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 JAM2P57087 298 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 PALB2Q86YC2 1186 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 PRMT6Q96LA8 375 aaPredicted RBP16.78■□□□□ 0.28
UBAP1-201ENST00000297661 CHORDC1Q9UHD1 332 aaPredicted RBP16.78■□□□□ 0.28
UBAP1-201ENST00000297661 NR2E1Q9Y466 385 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 TISP43B9A030 160 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 TBX3O15119 743 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 RWDD2BP57060 319 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 PRPF4BQ13523 1007 aaKnown RBP16.78■□□□□ 0.28
UBAP1-201ENST00000297661 RBBP5Q15291 538 aaKnown RBP16.78■□□□□ 0.28
UBAP1-201ENST00000297661 THEMIS2Q5TEJ8 643 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 SAMD7Q7Z3H4 446 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 LRRC34Q8IZ02 419 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 ELAC2Q9BQ52 826 aaKnown RBP16.78■□□□□ 0.28
UBAP1-201ENST00000297661 TAS2R14Q9NYV8 317 aa16.78■□□□□ 0.28
UBAP1-201ENST00000297661 CLRN2A0PK11 232 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 BHMG1C9JSJ3 638 aaPredicted RBP16.77■□□□□ 0.28
UBAP1-201ENST00000297661 CAND2O75155 1236 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 SNUPNO95149 360 aaKnown RBP16.77■□□□□ 0.28
UBAP1-201ENST00000297661 NQO1P15559 274 aaKnown RBP16.77■□□□□ 0.28
UBAP1-201ENST00000297661 ALDH5A1P51649 535 aaPredicted RBP16.77■□□□□ 0.28
UBAP1-201ENST00000297661 OTOP1Q7RTM1 612 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 PRCCQ92733 491 aaPredicted RBP16.77■□□□□ 0.28
UBAP1-201ENST00000297661 CALR3Q96L12 384 aaKnown RBP16.77■□□□□ 0.28
UBAP1-201ENST00000297661 SELENOSQ9BQE4 189 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 DPH5Q9H2P9 285 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 ABCF3Q9NUQ8 709 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 SAMD15Q9P1V8 674 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 FOSP01100 380 aaPredicted RBP16.77■□□□□ 0.28
UBAP1-201ENST00000297661 CCND1P24385 295 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 DRAP1Q14919 205 aaPredicted RBP16.77■□□□□ 0.28
UBAP1-201ENST00000297661 HSD17B14Q9BPX1 270 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 IDI2Q9BXS1 227 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 DNAJC12Q9UKB3 198 aa16.77■□□□□ 0.28
UBAP1-201ENST00000297661 PGRMC1O00264 195 aaKnown RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 TTI1O43156 1089 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 BLMHQ13867 455 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 C1orf186Q6ZWK4 172 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 GMCL1P1Q8NEA9 526 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 BORCS6Q96GS4 357 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 GMCL1Q96IK5 515 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 PPP1R9AQ9ULJ8 1098 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 BZW2Q9Y6E2 419 aaKnown RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 ARP10275 920 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 CIITAP33076 1130 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 ZNF211Q13398 564 aaPredicted RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 BMT2Q1RMZ1 405 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 ATXN2LQ8WWM7 1075 aaKnown RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 POLR3CQ9BUI4 534 aaPredicted RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 PCIF1Q9H4Z3 704 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 METTL14Q9HCE5 456 aaKnown RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 CES2O00748 559 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 GAS7O60861 476 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 UBOX5O94941 541 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 PECAM1P16284 738 aaPredicted RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 PSMC2P35998 433 aaKnown RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 PRKCIP41743 596 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 NCALDP61601 193 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 ODR4Q5SWX8 454 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 STRIP1Q5VSL9 837 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 RSBN1LQ6PCB5 846 aaPredicted RBP16.76■□□□□ 0.27
UBAP1-201ENST00000297661 VPS36Q86VN1 386 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 FAM178BQ8IXR5 827 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 OLIG1Q8TAK6 271 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 SLC35G2Q8TBE7 412 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 ACTRT1Q8TDG2 376 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 ARHGEF26Q96DR7 871 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.76■□□□□ 0.277e-7■■□□□ 13.4
UBAP1-201ENST00000297661 TRIM51Q9BSJ1 452 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 FAM167BQ9BTA0 163 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 PARVGQ9HBI0 331 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 ATP8A1Q9Y2Q0 1164 aa16.76■□□□□ 0.27
UBAP1-201ENST00000297661 LIN7AO14910 233 aaPredicted RBP16.75■□□□□ 0.27
UBAP1-201ENST00000297661 ZBTB48P10074 688 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms