RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 GIPC1O14908 333 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 UCHL3P15374 230 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 RPS12P25398 132 aaKnown RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 RWDD2BP57060 319 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 LONP2Q86WA8 852 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 RAPGEF5Q92565 580 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 FAM167AQ96KS9 214 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 KIF9Q9HAQ2 790 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 RRAGCQ9HB90 399 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 TBC1D22BQ9NU19 505 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 SSU72P8A0A1W2PR75 194 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 CLDN3O15551 220 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 ENTPD3O75355 529 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 CSF1RP07333 972 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 SSTR3P32745 418 aaPredicted RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 CXCL9Q07325 125 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 KNOP1Q1ED39 458 aaKnown RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 SLC17A8Q8NDX2 589 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 GABPB2Q8TAK5 448 aaPredicted RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 C9orf72Q96LT7 481 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 KCND1Q9NSA2 647 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 AFG3L2Q9Y4W6 797 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 IPO5O00410 1097 aaKnown RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 FLT1P17948 1338 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 GRM4Q14833 912 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 CEP128Q6ZU80 1094 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 SCN4BQ8IWT1 228 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 PRMT6Q96LA8 375 aaPredicted RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 ERGIC2Q96RQ1 377 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 TMEM206Q9H813 350 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 SCOCQ9UIL1 159 aa14.33□□□□□ -0.12
HPS3-201ENST00000296051 G3BP2Q9UN86 482 aaKnown RBP14.33□□□□□ -0.12
HPS3-201ENST00000296051 C19orf81C9J6K1 198 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 KBTBD13C9JR72 458 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 CETPP11597 493 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 CDC25CP30307 473 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 TGFB2P61812 414 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 COG7P83436 770 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 DTX3LQ8TDB6 740 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 MTA3Q9BTC8 594 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 TOPORSQ9NS56 1045 aaPredicted RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 DLC1Q96QB1 1528 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 PODXLO00592 558 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 CRCPO75575 148 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 FDX1P10109 184 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 ESRRAP11474 423 aaPredicted RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 JAK3P52333 1124 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 KRT76Q01546 638 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 BYSLQ13895 437 aaKnown RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 MAP7D1Q3KQU3 841 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 ZNF394Q53GI3 561 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 TMCO4Q5TGY1 634 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 C1orf228Q6PIY5 440 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 TTC30AQ86WT1 665 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 PASD1Q8IV76 773 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 ARMC2Q8NEN0 867 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 CCT6BQ92526 530 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 MAML1Q92585 1016 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 RNF25Q96BH1 459 aaPredicted RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 LRRC37BQ96QE4 947 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 ZNF302Q9NR11 478 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 FNDC3AQ9Y2H6 1198 aaKnown RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 FAM205AQ6ZU69 1335 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 TRIM59Q8IWR1 403 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 LRRC34Q8IZ02 419 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 AGBL3Q8NEM8 1001 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 TTC17Q96AE7 1141 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 NUDCD1Q96RS6 583 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 FHDC1Q9C0D6 1143 aaPredicted RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 MTIF3Q9H2K0 278 aaKnown RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 NOD2Q9HC29 1040 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 RGL1Q9NZL6 768 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 MAPK13O15264 365 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 NMT1P30419 496 aaKnown RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 BASP1P80723 227 aaKnown RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 PKN1Q16512 942 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 KIAA1755Q5JYT7 1200 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 EPM2AIP1Q7L775 607 aaPredicted RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 RPUSD2Q8IZ73 545 aaKnown RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 SMC1BQ8NDV3 1235 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 OR6J1Q8NGC5 347 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.32□□□□□ -0.12
HPS3-201ENST00000296051 SLC35G2Q8TBE7 412 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 GANCQ8TET4 914 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 GCNAQ96QF7 691 aa14.32□□□□□ -0.12
HPS3-201ENST00000296051 CNOT8Q9UFF9 292 aaKnown RBP14.32□□□□□ -0.12
HPS3-201ENST00000296051 PLS3P13797 630 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 MFAP3P55082 362 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 TRPM8Q7Z2W7 1104 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 GBP7Q8N8V2 638 aaPredicted RBP14.31□□□□□ -0.12
HPS3-201ENST00000296051 DYDC2Q96IM9 177 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms