RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 SWSAP1Q6NVH7 229 aa19.82■□□□□ 0.76
SHKBP1-201ENST00000291842 FMNL3Q8IVF7 1028 aa19.82■□□□□ 0.76
SHKBP1-201ENST00000291842 RNPC3Q96LT9 517 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-201ENST00000291842 TRIM31Q9BZY9 425 aa19.82■□□□□ 0.76
SHKBP1-201ENST00000291842 ANKEF1Q9NU02 776 aa19.82■□□□□ 0.76
SHKBP1-201ENST00000291842 USP20Q9Y2K6 914 aa19.82■□□□□ 0.76
SHKBP1-201ENST00000291842 ALG6Q9Y672 507 aa19.82■□□□□ 0.76
SHKBP1-201ENST00000291842 CCDC188H7C350 402 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 P4HA2O15460 535 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 RPS6KA5O75582 802 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 RGS20O76081 388 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 CCND2P30279 289 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 BAG6P46379 1132 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 DPH5Q9H2P9 285 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 RSPH14Q9UHP6 348 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 PFASO15067 1338 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 CHRNB2P17787 502 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 PTPRAP18433 802 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 ATP1A2P50993 1020 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 SLC39A4Q6P5W5 647 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 MAATS1Q7Z4T9 603 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 MREGQ8N565 214 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 ZNF280CQ8ND82 737 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 IWS1Q96ST2 819 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 TRIM51Q9BSJ1 452 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 PLAAQ9Y263 795 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 ADGRA3Q8IWK6 1321 aa19.81■□□□□ 0.76
SHKBP1-201ENST00000291842 CALCAP01258 141 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 IVLP07476 585 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 MMEP08473 750 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 DLATP10515 647 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 MARCKSL1P49006 195 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 IRAK1P51617 712 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 PPARDQ03181 441 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 SCYL3Q8IZE3 742 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 OR2W6PQ8NHA6 318 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 EPS8L1Q8TE68 723 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 PARD3BQ8TEW8 1205 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 POMGNT1Q8WZA1 660 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 TIPINQ9BVW5 301 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 CAPS2Q9BXY5 557 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 ERVK-5Q9HDB9 667 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 EXOC7Q9UPT5 735 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 MAP4K3Q8IVH8 894 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 TAS1R2Q8TE23 839 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 TMEM174Q8WUU8 243 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 DHX38Q92620 1227 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 KRT35Q92764 455 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 BTBD6Q96KE9 485 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 PICK1Q9NRD5 415 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 NOCTQ9UK39 431 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 DOCK5Q9H7D0 1870 aa19.8■□□□□ 0.76
SHKBP1-201ENST00000291842 SHOX2O60902 331 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 KCNA2P16389 499 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 HSD17B3P37058 310 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 HSPA9P38646 679 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 TGFB2P61812 414 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 GNGT1P63211 74 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 CUL1Q13616 776 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 MESDQ14696 234 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 TMEM132BQ14DG7 1078 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 CPNE8Q86YQ8 564 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 FAM71AQ8IYT1 594 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 CENPHQ9H3R5 247 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 SEPT9Q9UHD8 586 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 GPC5P78333 572 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 CEP85LQ5SZL2 805 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 KRT39Q6A163 491 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 RHOT2Q8IXI1 618 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 REPS2Q8NFH8 660 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 CCDC26Q8TAB7 109 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 SLC16A10Q8TF71 515 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 PI4K2AQ9BTU6 479 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 ZNF214Q9UL59 606 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 DAAM1Q9Y4D1 1078 aa19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 COL11A1P12107 1806 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-201ENST00000291842 MAPK13O15264 365 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 RPS12P25398 132 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 PRKG1Q13976 671 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 UAP1Q16222 522 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 ANGEL2Q5VTE6 544 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 OTUD6AQ7L8S5 288 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 CCDC60Q8IWA6 550 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 SAMD3Q8N6K7 520 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 TATDN2Q93075 761 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 GPRASP2Q96D09 838 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 SLITRK6Q9H5Y7 841 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 KIAA1217Q5T5P2 1943 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 ANKRD65E5RJM6 399 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 HNRNPDLO14979 420 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 PEX10O60683 326 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 RTN2O75298 545 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 STBD1O95210 358 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 MFAP3P55082 362 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 NSUN6Q8TEA1 469 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 GLG1Q92896 1179 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 BICD1Q96G01 975 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 CARD9Q9H257 536 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 GINM1Q9NU53 330 aa19.78■□□□□ 0.76
SHKBP1-201ENST00000291842 DSG3P32926 999 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms