RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 GLB1LQ6UWU2 654 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 MAEAQ7L5Y9 396 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 C4orf19Q8IY42 314 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 COLGALT2Q8IYK4 626 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 FAM20AQ96MK3 541 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 HSD17B14Q9BPX1 270 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 PAAF1Q9BRP4 392 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 NXF3Q9H4D5 531 aaKnown RBP9.84□□□□□ -0.83
TFF1-201ENST00000291527 RSAD1Q9HA92 442 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 RNF216Q9NWF9 866 aaPredicted RBP9.84□□□□□ -0.83
TFF1-201ENST00000291527 IPPQ9Y573 584 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 IRAK3Q9Y616 596 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 CACNA1IQ9P0X4 2223 aa9.84□□□□□ -0.83
TFF1-201ENST00000291527 STK36Q9NRP7 1315 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 ARL5CA6NH57 179 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 RFPL2O75678 378 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 SPATA31C1P0DKV0 1188 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 NPR3P17342 541 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 ARF4P18085 180 aaPredicted RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 RPL17P18621 184 aaKnown RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 NCLP19338 710 aaKnown RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 ARL2P36404 184 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 MLH1P40692 756 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 OR1G1P47890 313 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 PTENP60484 403 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 MBTD1Q05BQ5 628 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 ECM1Q16610 540 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 KIAA0319Q5VV43 1072 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 GALNT17Q6IS24 598 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 SRGAP1Q7Z6B7 1085 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 GPR149Q86SP6 731 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 ZBTB33Q86T24 672 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 GLYCTKQ8IVS8 523 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 SUGP1Q8IWZ8 645 aaKnown RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 RNF168Q8IYW5 571 aaPredicted RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 TMEM130Q8N3G9 435 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 NSUN7Q8NE18 718 aaKnown RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 PSPC1Q8WXF1 523 aaKnown RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 BSNDQ8WZ55 320 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 MTMR9Q96QG7 549 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 MRPL9Q9BYD2 267 aaKnown RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 C22orf23Q9BZE7 217 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 GPR62Q9BZJ7 368 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 KCNH6Q9H252 994 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 FAN1Q9Y2M0 1017 aa9.83□□□□□ -0.84
TFF1-201ENST00000291527 EP300Q09472 2414 aaPredicted RBP9.83□□□□□ -0.84
TFF1-201ENST00000291527 MYH15Q9Y2K3 1946 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 GVINP1Q7Z2Y8 2422 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 POTEMA6NI47 508 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 TEX28O15482 410 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 MED24O75448 989 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 ALDH2P05091 517 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 ITGA4P13612 1032 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 KCNA4P22459 653 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 KLRC2P26717 231 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 RFC5P40937 340 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 TXKP42681 527 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 MTHFRP42898 656 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 ITIH3Q06033 890 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 DSC1Q08554 894 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 CWF19L1Q69YN2 538 aaKnown RBP9.82□□□□□ -0.84
TFF1-201ENST00000291527 CES5AQ6NT32 575 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 FAM43BQ6ZT52 329 aaPredicted RBP9.82□□□□□ -0.84
TFF1-201ENST00000291527 ASCL5Q7RTU5 278 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 CABP7Q86V35 215 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 ZDHHC14Q8IZN3 488 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 SLC7A3Q8WY07 619 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 MYADMQ96S97 322 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 MTRQ99707 1265 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 INO80BQ9C086 356 aaPredicted RBP9.82□□□□□ -0.84
TFF1-201ENST00000291527 DBR1Q9UK59 544 aaKnown RBP9.82□□□□□ -0.84
TFF1-201ENST00000291527 SORCS3Q9UPU3 1222 aa9.82□□□□□ -0.84
TFF1-201ENST00000291527 CCDC195A0A1B0GUA6 201 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 INO80B-WBP1J3KQ70 363 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 TBX3O15119 743 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 ADAM12O43184 909 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 NPTXRO95502 500 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 GCFC2P16383 781 aaKnown RBP9.81□□□□□ -0.84
TFF1-201ENST00000291527 ATP2B1P20020 1258 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 KRT2P35908 639 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 RARRES1P49788 294 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 PTPN5P54829 565 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 CDC42EP1Q00587 391 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 NBR1Q14596 966 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 ATAT1Q5SQI0 421 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 POTEHQ6S545 545 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 PRSS55Q6UWB4 352 aaPredicted RBP9.81□□□□□ -0.84
TFF1-201ENST00000291527 PALB2Q86YC2 1186 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 TDRD5Q8NAT2 981 aaKnown RBP9.81□□□□□ -0.84
TFF1-201ENST00000291527 HASPINQ8TF76 798 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 GTF3C6Q969F1 213 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 ZNF707Q96C28 371 aaPredicted RBP9.81□□□□□ -0.84
TFF1-201ENST00000291527 PGBD4Q96DM1 585 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 RPS6KC1Q96S38 1066 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 HERC2P3Q9BVR0 1158 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 CSRNP2Q9H175 543 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 POLR3FQ9H1D9 316 aaPredicted RBP9.81□□□□□ -0.84
TFF1-201ENST00000291527 ZSWIM4Q9H7M6 989 aa9.81□□□□□ -0.84
TFF1-201ENST00000291527 TTC12Q9H892 705 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms