RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 GINM1Q9NU53 330 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 MROH7-TTC4A0A0A0MT08 1334 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 POTEMA6NI47 508 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 GNGT2O14610 69 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 SCTRP47872 440 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 KCNH2Q12809 1159 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 HDAC11Q96DB2 347 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 FAM193BQ96PV7 902 aaPredicted RBP18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 SUGCTQ9HAC7 445 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 CD209Q9NNX6 404 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 SEPT3Q9UH03 358 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 CD163L1Q9NR16 1453 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 RHOBTB3O94955 611 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 TRIM72Q6ZMU5 477 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 SLC44A5Q8NCS7 719 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 PNKPQ96T60 521 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 DIP2BQ9P265 1576 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 LRRN2O75325 713 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 FDX1P10109 184 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 CTCFP49711 727 aaPredicted RBP18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 BSPRYQ5W0U4 402 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 RAPH1Q70E73 1250 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 USP38Q8NB14 1042 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 FAM210AQ96ND0 272 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 SERPINB12Q96P63 405 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 KCNK16Q96T55 309 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 ATXN2Q99700 1313 aaKnown RBP18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 FAM47DPA6NHR8 397 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 DEAF1O75398 565 aaPredicted RBP18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 RMDN2Q96LZ7 410 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 CPVLQ9H3G5 476 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 PSAPP07602 524 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 NAB2Q15742 525 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 VPS72Q15906 364 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 TMBIM4Q9HC24 238 aa18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 SEPT9Q9UHD8 586 aaPredicted RBP18.61■□□□□ 0.57
PCDHA13-201ENST00000289272 TLR3O15455 904 aaKnown RBP18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 CRKP46108 304 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 MFN1Q8IWA4 741 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 NOA1Q8NC60 698 aaKnown RBP18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 PHF20Q9BVI0 1012 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 BHMT2Q9H2M3 363 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 CCDC134Q9H6E4 229 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 CD248Q9HCU0 757 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 WDR91A4D1P6 747 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 IGBP1P78318 339 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 SCYL2Q6P3W7 929 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 CEP95Q96GE4 821 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 C10orf88Q9H8K7 445 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 GYPCP04921 128 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 FXR1P51114 621 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 PPP2R5DQ14738 602 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 FIGNQ5HY92 759 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 SP8Q8IXZ3 490 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 NUB1Q9Y5A7 615 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 PHF20L1A8MW92 1017 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 CALB1P05937 261 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 SKOR1P84550 965 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 SPOUT1Q5T280 376 aaKnown RBP18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 ZNF34Q8IZ26 560 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 ATL2Q8NHH9 583 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 DNAJC7Q99615 494 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 KIAA1586Q9HCI6 787 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 ZHX2Q9Y6X8 837 aa18.6■□□□□ 0.57
PCDHA13-201ENST00000289272 IGF2BP3O00425 579 aaKnown RBP eCLIP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 ASAP2O43150 1006 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 TAC1P20366 129 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 SRBD1Q8N5C6 995 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 HIC2Q96JB3 615 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 CEP19Q96LK0 163 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 ERGIC2Q96RQ1 377 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 IRX2Q9BZI1 471 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 FMR1Q06787 632 aaKnown RBP eCLIP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 TAF1BQ53T94 588 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 SPDYCQ5MJ68 293 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 TERB1Q8NA31 727 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 TTC1Q99614 292 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 SUCLA2Q9P2R7 463 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 CFAP69A5D8W1 941 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 WDR46O15213 610 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 TAP1Q03518 808 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 GIMAP8Q8ND71 665 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 DHX38Q92620 1227 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 UBN1Q9NPG3 1134 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 RBM12Q9NTZ6 932 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 ARHGEF28Q8N1W1 1705 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 LRRIQ3A6PVS8 624 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 KLHL2O95198 593 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 NR3C1P04150 777 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 PAPOLAP51003 745 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 EIF1ADQ8N9N8 165 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 KCTD6Q8NC69 237 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 ZNF564Q8TBZ8 553 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 ANKRD36BP1Q96IX9 119 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 C7orf25Q9BPX7 421 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 MED10Q9BTT4 135 aa18.59■□□□□ 0.57
PCDHA13-201ENST00000289272 ZNF341Q9BYN7 854 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms