RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 HOXD8P13378 290 aaPredicted RBP22.8■■□□□ 1.24
YBX3-202ENST00000279550 CYBAP13498 195 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 MARK3P27448 753 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 MAGEA1P43355 309 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 MAP2K1Q02750 393 aaPredicted RBP22.8■■□□□ 1.24
YBX3-202ENST00000279550 KLHL30Q0D2K2 578 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 KIF5AQ12840 1032 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 SLC17A8Q8NDX2 589 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 MCPH1Q8NEM0 835 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 HVCN1Q96D96 273 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 NTPCRQ9BSD7 190 aaKnown RBP22.8■■□□□ 1.24
YBX3-202ENST00000279550 INTS2Q9H0H0 1204 aaKnown RBP22.8■■□□□ 1.24
YBX3-202ENST00000279550 FBXL5Q9UKA1 691 aa22.8■■□□□ 1.24
YBX3-202ENST00000279550 GOLGA8IPA6NC78 632 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 GOLGA8JA6NMD2 632 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 DYNC1LI2O43237 492 aaPredicted RBP22.79■■□□□ 1.24
YBX3-202ENST00000279550 ADRB2P07550 413 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 MMP3P08254 477 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 AKR1A1P14550 325 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 ADSSP30520 456 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 SMTNP53814 917 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 MYL7Q01449 175 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 SLC39A4Q6P5W5 647 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 XXYLT1Q8NBI6 393 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 TRPV1Q8NER1 839 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 BBXQ8WY36 941 aaPredicted RBP22.79■■□□□ 1.24
YBX3-202ENST00000279550 LENG1Q96BZ8 264 aaPredicted RBP22.79■■□□□ 1.24
YBX3-202ENST00000279550 SPAG5Q96R06 1193 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 ERAP1Q9NZ08 941 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 HTTP42858 3142 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 PJA2O43164 708 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 ATP1A1P05023 1023 aaKnown RBP22.79■■□□□ 1.24
YBX3-202ENST00000279550 PNMA6AP0CW24 399 aaPredicted RBP22.79■■□□□ 1.24
YBX3-202ENST00000279550 C1QTNF8P60827 252 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 EMC2Q15006 297 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 TAS1R3Q7RTX0 852 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 ATP8B4Q8TF62 1192 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 CEP89Q96ST8 783 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 TSGA10Q9BZW7 698 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 HDAC6Q9UBN7 1215 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 MYO6Q9UM54 1294 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 Q9Y3F1 56 aa22.79■■□□□ 1.24
YBX3-202ENST00000279550 A0A087X0T9 212 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 A6NJR5 290 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 ENC1O14682 589 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 FAM228BP0C875 321 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 KRT13P13646 458 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 RTP1P59025 263 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 SNRPFP62306 86 aaKnown RBP22.78■■□□□ 1.24
YBX3-202ENST00000279550 PPP3CAQ08209 521 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 PLCB4Q15147 1175 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 TARBP2Q15633 366 aaKnown RBP22.78■■□□□ 1.24
YBX3-202ENST00000279550 DGKDQ16760 1214 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 ZNF571Q7Z3V5 609 aaPredicted RBP22.78■■□□□ 1.24
YBX3-202ENST00000279550 PDCL2Q8N4E4 241 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 EHBP1Q8NDI1 1231 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 SECISBP2LQ93073 1101 aaKnown RBP22.78■■□□□ 1.24
YBX3-202ENST00000279550 BEGAINQ9BUH8 593 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 C17orf75Q9HAS0 396 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 EXOC7Q9UPT5 735 aa22.78■■□□□ 1.24
YBX3-202ENST00000279550 EFCAB8A8MWE9 144 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 ZNF286BP0CG31 522 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 ELNP15502 786 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 VAMP7P51809 220 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 TRIM32Q13049 653 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 INTS8Q75QN2 995 aaKnown RBP22.77■■□□□ 1.24
YBX3-202ENST00000279550 RSRC2Q7L4I2 434 aaKnown RBP22.77■■□□□ 1.24
YBX3-202ENST00000279550 LMO3Q8TAP4 145 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 C16orf70Q9BSU1 422 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 DHX33Q9H6R0 707 aaKnown RBP22.77■■□□□ 1.24
YBX3-202ENST00000279550 SALL4Q9UJQ4 1053 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 CEP350Q5VT06 3117 aa22.77■■□□□ 1.24
YBX3-202ENST00000279550 MOCS3O95396 460 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 POLGP54098 1239 aaPredicted RBP22.77■■□□□ 1.23
YBX3-202ENST00000279550 PTK2Q05397 1052 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 CACNB2Q08289 660 aaPredicted RBP22.77■■□□□ 1.23
YBX3-202ENST00000279550 ARHGEF6Q15052 776 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 CBWD2Q8IUF1 395 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 ASAP3Q8TDY4 903 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 TMEM143Q96AN5 459 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 SAAL1Q96ER3 474 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 PPME1Q9Y570 386 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 CAPN6Q9Y6Q1 641 aa22.77■■□□□ 1.23
YBX3-202ENST00000279550 MAPK13O15264 365 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 ADCY3O60266 1144 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 PRKCIP41743 596 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 TUBB2AQ13885 445 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 SLC18A3Q16572 532 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 TRAPPC11Q7Z392 1133 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 RAET1EQ8TD07 263 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 SLC7A3Q8WY07 619 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 UBXN4Q92575 508 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 TUBB2BQ9BVA1 445 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 RNPEPQ9H4A4 650 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 ARHGAP28Q9P2N2 729 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 PUF60Q9UHX1 559 aaKnown RBP22.76■■□□□ 1.23
YBX3-202ENST00000279550 TSKSQ9UJT2 592 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 DNAJC12Q9UKB3 198 aa22.76■■□□□ 1.23
YBX3-202ENST00000279550 TRPC6Q9Y210 931 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms