RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 BTBD18B2RXH4 712 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 C2CD2LO14523 706 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 NRP1O14786 923 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 USO1O60763 962 aaKnown RBP14.19□□□□□ -0.14
CD44-203ENST00000278386 DGAT1O75907 488 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 KLRC2P26717 231 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 TXKP42681 527 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 PTPN5P54829 565 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 PTENP60484 403 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 CAPSQ13938 189 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 PCBP1Q15365 356 aaKnown RBP eCLIP14.19□□□□□ -0.14
CD44-203ENST00000278386 ATAT1Q5SQI0 421 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 TMC5Q6UXY8 1006 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 HACE1Q8IYU2 909 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 SMG8Q8ND04 991 aaKnown RBP14.19□□□□□ -0.14
CD44-203ENST00000278386 ASAP3Q8TDY4 903 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 CCDC51Q96ER9 411 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 ASIC4Q96FT7 647 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 PRRX2Q99811 253 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 POLR3FQ9H1D9 316 aaPredicted RBP14.19□□□□□ -0.14
CD44-203ENST00000278386 UBN1Q9NPG3 1134 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 MRPL17Q9NRX2 175 aaKnown RBP14.19□□□□□ -0.14
CD44-203ENST00000278386 ANKEF1Q9NU02 776 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 SORCS3Q9UPU3 1222 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 HES2Q9Y543 173 aa14.19□□□□□ -0.14
CD44-203ENST00000278386 PIEZO1Q92508 2521 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 WNT7AO00755 349 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 ALDH2P05091 517 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 ATP2B1P20020 1258 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 SCNN1GP51170 649 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 NEK4P51957 841 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 VCPP55072 806 aaKnown RBP14.18□□□□□ -0.14
CD44-203ENST00000278386 MBTD1Q05BQ5 628 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 IER5LQ5T953 404 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 PIGOQ8TEQ8 1089 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 SLC22A17Q8WUG5 538 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 KLHL5Q96PQ7 755 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 GAD1Q99259 594 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 HERC2P3Q9BVR0 1158 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 CSRNP2Q9H175 543 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 NXF3Q9H4D5 531 aaKnown RBP14.18□□□□□ -0.14
CD44-203ENST00000278386 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
CD44-203ENST00000278386 ARL5CA6NH57 179 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 LRRIQ4A6NIV6 560 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 NR1I2O75469 434 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 LYPLA2O95372 231 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 NPTXRO95502 500 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 PDGFBP01127 241 aaPredicted RBP14.17□□□□□ -0.14
CD44-203ENST00000278386 SOD2P04179 222 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 ASGR2P07307 311 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 ARF4P18085 180 aaPredicted RBP14.17□□□□□ -0.14
CD44-203ENST00000278386 MCM7P33993 719 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 RARRES1P49788 294 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 CLCN4P51793 760 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 GUCY1B3Q02153 619 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 SAFBQ15424 915 aaKnown RBP eCLIP14.17□□□□□ -0.14
CD44-203ENST00000278386 CCDC149Q6ZUS6 474 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 MAEAQ7L5Y9 396 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 UBALD2Q8IYN6 164 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 MAN1C1Q9NR34 630 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 MARCH5Q9NX47 278 aa14.17□□□□□ -0.14
CD44-203ENST00000278386 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
CD44-203ENST00000278386 BRD1O95696 1058 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 ADH1AP07327 375 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 CNPP09543 421 aaKnown RBP14.16□□□□□ -0.14
CD44-203ENST00000278386 GLRA2P23416 452 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 GLUD2P49448 558 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 TMEM132AQ24JP5 1023 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 ELMSAN1Q6PJG2 1045 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 CDR2LQ86X02 465 aaPredicted RBP14.16□□□□□ -0.14
CD44-203ENST00000278386 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
CD44-203ENST00000278386 COLGALT2Q8IYK4 626 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 FEZF2Q8TBJ5 459 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 ACSF2Q96CM8 615 aaPredicted RBP14.16□□□□□ -0.14
CD44-203ENST00000278386 ZFP42Q96MM3 310 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 RPS6KC1Q96S38 1066 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 HSD17B14Q9BPX1 270 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 SMOC2Q9H3U7 446 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 SSX2IPQ9Y2D8 614 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 GIT1Q9Y2X7 761 aa14.16□□□□□ -0.14
CD44-203ENST00000278386 TRIP11Q15643 1979 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 A0A087WWV3 80 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 B4GALT5O43286 388 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 AKAP5P24588 427 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 ARL2P36404 184 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 POU5F1BQ06416 359 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 ST3GAL1Q11201 340 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 AMHR2Q16671 573 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 SLC27A1Q6PCB7 646 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 GPR149Q86SP6 731 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 CCDC83Q8IWF9 413 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 ZBTB8OSQ8IWT0 167 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 ZDHHC14Q8IZN3 488 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 PLCD3Q8N3E9 789 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 MTMR9Q96QG7 549 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 PHOX2BQ99453 314 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 NFKBIZQ9BYH8 718 aa14.15□□□□□ -0.14
CD44-203ENST00000278386 TMEM60Q9H2L4 133 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms