RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 FGF19O95750 216 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 AKR1B1P15121 316 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 PRELPP51888 382 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 LRRC8AQ8IWT6 810 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 HEXIM2Q96MH2 286 aaKnown RBP8.34□□□□□ -1.07
USP3-201ENST00000268049 ZNF558Q96NG5 402 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 SEPT5Q99719 369 aaPredicted RBP8.34□□□□□ -1.07
USP3-201ENST00000268049 TMEM47Q9BQJ4 181 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 USTQ9Y2C2 406 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 PARP4Q9UKK3 1724 aaKnown RBP8.34□□□□□ -1.07
USP3-201ENST00000268049 ANKRD65E5RJM6 399 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 SLC9A3R1O14745 358 aaPredicted RBP8.34□□□□□ -1.07
USP3-201ENST00000268049 OPLAHO14841 1288 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 GAS2O43903 313 aaKnown RBP8.34□□□□□ -1.07
USP3-201ENST00000268049 PFKFB2O60825 505 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 ASMTLO95671 621 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 PSMC5P62195 406 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 ZNF484Q5JVG2 852 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 E4F1Q66K89 784 aaPredicted RBP8.34□□□□□ -1.07
USP3-201ENST00000268049 ZC3H14Q6PJT7 736 aaKnown RBP8.34□□□□□ -1.07
USP3-201ENST00000268049 CD99L2Q8TCZ2 262 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 MAN1C1Q9NR34 630 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 CREBZFQ9NS37 354 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 STAP1Q9ULZ2 295 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 PCDHA4Q9UN74 947 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 NR2E1Q9Y466 385 aa8.34□□□□□ -1.07
USP3-201ENST00000268049 KIAA0391O15091 583 aaKnown RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 MAN1A2O60476 641 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 HSPA1AP0DMV8 641 aaKnown RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 HSPA1BP0DMV9 641 aaKnown RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 LIFRP42702 1097 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 C21orf59P57076 290 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 CENPCQ03188 943 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 IL31Q6EBC2 164 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 TAF2Q6P1X5 1199 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 NOTUMQ6P988 496 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 FBXO38Q6PIJ6 1188 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SLC30A9Q6PML9 568 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 DYMQ7RTS9 669 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 NEDD1Q8NHV4 660 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 OSCP1Q8WVF1 389 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 ZKSCAN4Q969J2 545 aaPredicted RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 SH3KBP1Q96B97 665 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 YIPF2Q9BWQ6 316 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 FTHL17Q9BXU8 183 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 RNF26Q9BY78 433 aaPredicted RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 ABHD16BQ9H3Z7 469 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 CUEDC2Q9H467 287 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 NYAP2Q9P242 653 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 CTTNBP2NLQ9P2B4 639 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SH2B2O14492 632 aaPredicted RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 CUTAO60888 179 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 NPM3O75607 178 aaKnown RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 ATXN8OSP0DMR3 200 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 GFAPP14136 432 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 VCLP18206 1134 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 TRAPPC10P48553 1259 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 BACE1P56817 501 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 OSTNP61366 133 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 PTK2BQ14289 1009 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 DCAF4L1Q3SXM0 396 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 MGAT5BQ3V5L5 792 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 ATAT1Q5SQI0 421 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 TDRD10Q5VZ19 366 aaKnown RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 CASC4Q6P4E1 433 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 TOGARAM2Q6ZUX3 1019 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 KAZALD1Q96I82 304 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SEPT10Q9P0V9 454 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 UXTQ9UBK9 157 aaPredicted RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 LCMT1Q9UIC8 334 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 GDAQ9Y2T3 454 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 hCG_2014768A0A024R1R8 64 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 CCDC151A5D8V7 595 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 ALDH2P05091 517 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 MAN1A1P33908 653 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SOX10P56693 466 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 FPGSQ05932 587 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 ANKS3Q6ZW76 656 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 RAB44Q7Z6P3 723 aaPredicted RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 AK8Q96MA6 479 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 NCK2O43639 380 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 KRT15P19012 456 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SERPINB6P35237 376 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 PPP4CP60510 307 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SKOR1P84550 965 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SV2CQ496J9 727 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 DSG4Q86SJ6 1040 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SCG3Q8WXD2 468 aaKnown RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 RILPQ96NA2 401 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 TIPINQ9BVW5 301 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 C1QTNF7Q9BXJ2 289 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 STK17AQ9UEE5 414 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 DSEQ9UL01 958 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 JAK2O60674 1132 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 ABCB4P21439 1286 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 CASP7P55210 303 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 SNAP25P60880 206 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 FKBP1AP62942 108 aaKnown RBP8.33□□□□□ -1.08
USP3-201ENST00000268049 ME3Q16798 604 aa8.33□□□□□ -1.08
USP3-201ENST00000268049 LONRF3Q496Y0 759 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms