RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 PPP2R5CQ13362 524 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 KSR1Q8IVT5 923 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 TRIM59Q8IWR1 403 aa17.85■□□□□ 0.45
PHRF1-201ENST00000264555 ACTR5Q9H9F9 607 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-201ENST00000264555 MED24O75448 989 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 MUTP22033 750 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 SCP2P22307 547 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 CCNI2Q6ZMN8 369 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-201ENST00000264555 DNAAF3Q8N9W5 541 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 ANKEF1Q9NU02 776 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 ATP8B3O60423 1300 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 ICAM1P05362 532 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 SLC15A2Q16348 729 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 FAM163AQ96GL9 167 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-201ENST00000264555 DDX56Q9NY93 547 aaKnown RBP17.84■□□□□ 0.45
PHRF1-201ENST00000264555 IPO11Q9UI26 975 aaKnown RBP17.84■□□□□ 0.45
PHRF1-201ENST00000264555 IQANK1A0A1B0GTG1 560 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 TAP1Q03518 808 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 SNCBQ16143 134 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 CENPPQ6IPU0 288 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 ATP6V1G3Q96LB4 118 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 TTC25Q96NG3 672 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 CA4P22748 312 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 CIITAP33076 1130 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 PSMC1P62191 440 aaKnown RBP17.84■□□□□ 0.45
PHRF1-201ENST00000264555 ABI1Q8IZP0 508 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 BEST2Q8NFU1 509 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 VCX3BQ9H321 246 aa17.84■□□□□ 0.45
PHRF1-201ENST00000264555 MMEP08473 750 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 GNAT1P11488 350 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 CAP2P40123 477 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 KYAT1Q16773 422 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 RNF149Q8NC42 400 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 RDM1Q8NG50 284 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 GDAP1Q8TB36 358 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 RNF181Q9P0P0 153 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 SAT1P21673 171 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 MAGOHP61326 146 aaKnown RBP17.83■□□□□ 0.45
PHRF1-201ENST00000264555 NR1H3Q13133 447 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 Q4G0T1 1027 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 KLC2Q9H0B6 622 aa17.83■□□□□ 0.45
PHRF1-201ENST00000264555 ARHGAP42A6NI28 874 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 DPEP1P16444 411 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 HVCN1Q96D96 273 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 AK9Q5TCS8 1911 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 OATP04181 439 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 ECE1P42892 770 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 CDK17Q00537 523 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 ARL13BQ3SXY8 428 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 LMBRD2Q68DH5 695 aaPredicted RBP17.83■□□□□ 0.44
PHRF1-201ENST00000264555 C2orf69Q8N8R5 385 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 EFCC1Q9HA90 598 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 KNDC1Q76NI1 1749 aa17.83■□□□□ 0.44
PHRF1-201ENST00000264555 TMEM253P0C7T8 217 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 MAP3K21Q5TCX8 1036 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 ACER1Q8TDN7 264 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 FAF2Q96CS3 445 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 RUSC1Q9BVN2 902 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 UNC45AQ9H3U1 944 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 M0QYV0 167 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 PPP2R2AP63151 447 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 MXD4Q14582 209 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-201ENST00000264555 CCDC38Q502W7 563 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 DSTYKQ6XUX3 929 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
PHRF1-201ENST00000264555 TMEM143Q96AN5 459 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 SNF8Q96H20 258 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 FBXL5Q9UKA1 691 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 SLIT3O75094 1523 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 PRKCBP05771 671 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 PPP6R3Q5H9R7 873 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-201ENST00000264555 PHLDB3Q6NSJ2 640 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 SEPT1Q8WYJ6 367 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 DEFB129Q9H1M3 183 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 DDTLA6NHG4 134 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-201ENST00000264555 PFDN6O15212 129 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 PLA2G4FQ68DD2 849 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 CFAP36Q96G28 342 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 VCXQ9H320 206 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 ANGEL2Q5VTE6 544 aaKnown RBP17.82■□□□□ 0.44
PHRF1-201ENST00000264555 AGPAT3Q9NRZ7 376 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 INTUQ9ULD6 942 aa17.82■□□□□ 0.44
PHRF1-201ENST00000264555 SHMT1P34896 483 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 EMC2Q15006 297 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 NXNQ6DKJ4 435 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 PPP1R12CQ9BZL4 782 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 TMX2Q9Y320 296 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 MYL3P08590 195 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 RPS6P62753 249 aaKnown RBP17.81■□□□□ 0.44
PHRF1-201ENST00000264555 PRKCEQ02156 737 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 SLC16A10Q8TF71 515 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 TMEM8AQ9HCN3 771 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 RBM12Q9NTZ6 932 aaKnown RBP17.81■□□□□ 0.44
PHRF1-201ENST00000264555 MAP3K20Q9NYL2 800 aaKnown RBP17.81■□□□□ 0.44
PHRF1-201ENST00000264555 FAM237AA0A1B0GTK4 181 aa17.81■□□□□ 0.44
PHRF1-201ENST00000264555 TXNP10599 105 aaKnown RBP17.81■□□□□ 0.44
PHRF1-201ENST00000264555 KLRC1P26715 233 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms