RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 KATNAL1Q9BW62 490 aa17.91■□□□□ 0.46
CROCCP3-201ENST00000263511 WNT8AQ9H1J5 351 aa17.91■□□□□ 0.46
CROCCP3-201ENST00000263511 ZNF70Q9UC06 446 aaPredicted RBP17.91■□□□□ 0.46
CROCCP3-201ENST00000263511 LAMC1P11047 1609 aa17.91■□□□□ 0.46
CROCCP3-201ENST00000263511 MXD4Q14582 209 aaPredicted RBP17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 RASIP1Q5U651 963 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 SNX19Q92543 992 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 SMARCAD1Q9H4L7 1026 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 RASA4BC9J798 803 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 RASA4O43374 803 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 GRIN3BO60391 1043 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 ZNF189O75820 626 aaPredicted RBP17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 TRAIPQ9BWF2 469 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 VPS11Q9H270 941 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 CHRNA3P32297 505 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 CDK17Q00537 523 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 GTF3C2Q8WUA4 911 aaPredicted RBP17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 TRIM55Q9BYV6 548 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 KRT82Q9NSB4 513 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 PARVAQ9NVD7 372 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 PI4K2BG5E9Z4 385 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 ROR1Q01973 937 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 ACCSLQ4AC99 568 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 FBXO41Q8TF61 875 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 SEPT1Q8WYJ6 367 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 ULK4Q96C45 1275 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 SIK2Q9H0K1 926 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 RGL1Q9NZL6 768 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 A0A1W2PQC6 194 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 PITPNM3Q9BZ71 974 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 TRIM15Q9C019 465 aa17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 TTC7AQ9ULT0 858 aaPredicted RBP17.9■□□□□ 0.46
CROCCP3-201ENST00000263511 C1orf167Q5SNV9 1468 aa17.89■□□□□ 0.46
CROCCP3-201ENST00000263511 GOLGA8MH3BSY2 632 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 COPS2P61201 443 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 AP1B1Q10567 949 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 SHC4Q6S5L8 630 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 FAM151AQ8WW52 585 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 MTIF3Q9H2K0 278 aaKnown RBP17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 ADGRB3O60242 1522 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 E5RI56 91 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 ESRRBO95718 433 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 CDC42EP5Q6NZY7 148 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 CCSER1Q9C0I3 900 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 KIF28PB7ZC32 967 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 TBX3O15119 743 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 CTIFO43310 598 aaKnown RBP17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 ARID5BQ14865 1188 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 GLYCTKQ8IVS8 523 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 CERKQ8TCT0 537 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 DDX50Q9BQ39 737 aaKnown RBP17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 TTC26A0AVF1 554 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 NMT1P30419 496 aaKnown RBP17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 ESRRGP62508 458 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 RFFLQ8WZ73 363 aa17.89■□□□□ 0.45
CROCCP3-201ENST00000263511 GRID2IPA4D2P6 1211 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 SLC16A3O15427 465 aaKnown RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 SRGAP2O75044 1071 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 GH1P01241 217 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 PRAMEP78395 509 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 ZNF211Q13398 564 aaPredicted RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 EXOC4Q96A65 974 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 PGBD4Q96DM1 585 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 PNPLA6Q8IY17 1366 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 STXBP3O00186 592 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 DYNC1LI2O43237 492 aaPredicted RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 MRPS25P82663 173 aaKnown RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 EXOSC10Q01780 885 aaKnown RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 WDR72Q3MJ13 1102 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 NUDT18Q6ZVK8 323 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.88■□□□□ 0.452e-6■■■■□ 25.6
CROCCP3-201ENST00000263511 TRPV6Q9H1D0 765 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 VCPKMTQ9H867 229 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 ASAP2O43150 1006 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 DCTN3O75935 186 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 TMCC1O94876 653 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 NR3C2P08235 984 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 ACAD11Q709F0 780 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 SYT2Q8N9I0 419 aaPredicted RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 TMEM106CQ9BVX2 250 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 ACTR5Q9H9F9 607 aaPredicted RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 PRDM5Q9NQX1 630 aaPredicted RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 APOBEC2Q9Y235 224 aaKnown RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 SPATA31A1Q5TZJ5 1347 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 DNAJC8O75937 253 aaPredicted RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 GUCY1A2P33402 732 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 FSCBQ5H9T9 825 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 ANGEL2Q5VTE6 544 aaKnown RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 TADA2BQ86TJ2 420 aa17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 MRPL46Q9H2W6 279 aaKnown RBP17.88■□□□□ 0.45
CROCCP3-201ENST00000263511 KBTBD13C9JR72 458 aa17.87■□□□□ 0.45
CROCCP3-201ENST00000263511 MAGEB2O15479 319 aa17.87■□□□□ 0.45
CROCCP3-201ENST00000263511 ZNF157P51786 506 aaPredicted RBP17.87■□□□□ 0.45
CROCCP3-201ENST00000263511 CDH6P55285 790 aa17.87■□□□□ 0.45
CROCCP3-201ENST00000263511 ZNF235Q14590 738 aa17.87■□□□□ 0.45
CROCCP3-201ENST00000263511 STILQ15468 1287 aa17.87■□□□□ 0.45
CROCCP3-201ENST00000263511 TRIM59Q8IWR1 403 aa17.87■□□□□ 0.45
CROCCP3-201ENST00000263511 ZNF212Q9UDV6 495 aa17.87■□□□□ 0.45
CROCCP3-201ENST00000263511 TJP2Q9UDY2 1190 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms