RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PLEKHO2Q8TD55 490 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 ZNF668Q96K58 619 aaPredicted RBP24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 MFSD14AQ96MC6 490 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 CRACR2AQ9BSW2 395 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 SPC25Q9HBM1 224 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 AGPAT5Q9NUQ2 364 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 A0A0B4J269 797 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 TTLL13PA6NNM8 815 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 EXTL3O43909 919 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 PGK1P00558 417 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 VTNP04004 478 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 HOXC8P31273 242 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 CHMP4BP1P59074 171 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 ZBED6P86452 979 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 ENPEPQ07075 957 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 HIC1Q14526 733 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 C1orf220Q5T0J3 134 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 DPY19L2P1Q6NXN4 242 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 RAET1EQ8TD07 263 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 ZBTB45Q96K62 511 aaPredicted RBP24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 ACO2Q99798 780 aaKnown RBP24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 MTG1Q9BT17 334 aaPredicted RBP24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 LSM14BQ9BX40 385 aaKnown RBP24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 EDEM3Q9BZQ6 932 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 KIAA1586Q9HCI6 787 aa24.94■■□□□ 1.58
SMARCB1-201ENST00000263121 ACKR2O00590 384 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 NOL4O94818 638 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 DLG4P78352 724 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 ARHGEF6Q15052 776 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 EXOC3L4Q17RC7 722 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 GBP6Q6ZN66 633 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 OR8K1Q8NGG5 319 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 PPP1R13LQ8WUF5 828 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 NAA15Q9BXJ9 866 aaKnown RBP24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 MINDY3Q9H8M7 445 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 PLCB1Q9NQ66 1216 aa24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 RRAGDQ9NQL2 400 aaPredicted RBP24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 AGO2Q9UKV8 859 aaKnown RBP24.93■■□□□ 1.58
SMARCB1-201ENST00000263121 A0A087WZ62 844 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 SMIM35A0A1B0GVV1 85 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 INO80B-WBP1J3KQ70 363 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 TOM1L1O75674 476 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 GPC3P51654 580 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 CYP24A1Q07973 514 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 FAM187BQ17R55 369 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 CBWD6Q4V339 395 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 CBWD3Q5JTY5 395 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 CBWD5Q5RIA9 395 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 TMC2Q8TDI7 906 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 FDXACB1Q9BRP7 624 aaPredicted RBP24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 INO80BQ9C086 356 aaPredicted RBP24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 XPNPEP3Q9NQH7 507 aa24.92■■□□□ 1.58
SMARCB1-201ENST00000263121 ARHGAP6O43182 974 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 PON1P27169 355 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 PRMT2P55345 433 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 HSP90AA2PQ14568 343 aaPredicted RBP24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 ZNF410Q86VK4 478 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 C17orf53Q8N3J3 647 aaPredicted RBP24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 FAM213AQ9BRX8 229 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 GANQ9H2C0 597 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 PRMT7Q9NVM4 692 aaPredicted RBP24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 CEP72Q9P209 647 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 ANKFY1Q9P2R3 1169 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 SCN10AQ9Y5Y9 1956 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 ABLIM1O14639 778 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 ZEB2O60315 1214 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 IQCF3P0C7M6 154 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 SLC9A1P19634 815 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 TSHZ1Q6ZSZ6 1077 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 KLHDC9Q8NEP7 349 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 ZNF397Q8NF99 534 aaPredicted RBP24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 PARD3BQ8TEW8 1205 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 BAP1Q92560 729 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 MSTO1Q9BUK6 570 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 GCNT4Q9P109 453 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 HDAC6Q9UBN7 1215 aa24.91■■□□□ 1.58
SMARCB1-201ENST00000263121 ZNF233A6NK53 670 aa24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 LDHAP00338 332 aaKnown RBP24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 CYP2C9P11712 490 aa24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 PROZP22891 400 aa24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 CST5P28325 142 aaPredicted RBP24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 NLRP11P59045 1033 aaKnown RBP24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 MYL7Q01449 175 aa24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 PPP3CAQ08209 521 aa24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 PRPF4BQ13523 1007 aaKnown RBP24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 CRELD2Q6UXH1 353 aaPredicted RBP24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 RUFY4Q6ZNE9 571 aa24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 PPP1R16BQ96T49 567 aa24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 PTPRHQ9HD43 1115 aa24.9■■□□□ 1.58
SMARCB1-201ENST00000263121 C17orf102A2RUQ5 167 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 PMM2O15305 246 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 P4HA2O15460 535 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 CLDN3O15551 220 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 N4BP1O75113 896 aaKnown RBP24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 CDC42EP1Q00587 391 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 APBA1Q02410 837 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 MCL1Q07820 350 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 MEA1Q16626 185 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 AMHR2Q16671 573 aa24.89■■□□□ 1.58
SMARCB1-201ENST00000263121 CCSAPQ6IQ19 270 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms