RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 SYNGAP1Q96PV0 1343 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 MANSC4A6NHS7 340 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 SPATA31C2B4DYI2 1134 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 POLR3GO15318 223 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 PPFIA4O75335 1185 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 SLC1A1P43005 524 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 PAPD7Q5XG87 772 aaKnown RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 REXO1L1PQ8IX06 675 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 TMEM35BQ8NCS4 154 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 MICAL1Q8TDZ2 1067 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 CCDC160A6NGH7 325 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 LRRC53A6NM62 1247 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 PPP1R11O60927 126 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-201ENST00000262539 HERVK_113P62684 666 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 IGBP1P78318 339 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 CUL1Q13616 776 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 ZBED2Q9BTP6 218 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 FBXO28Q9NVF7 368 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 CYP39A1Q9NYL5 469 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 SEPT9Q9UHD8 586 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-201ENST00000262539 DNAJC12Q9UKB3 198 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 DENND3A2RUS2 1198 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 CARNS1A5YM72 827 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 TRIM49BA6NDI0 452 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 CALB1P05937 261 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 ITGB5P18084 799 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 NNTQ13423 1086 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 WHAMMQ8TF30 809 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 TSC1Q92574 1164 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 TRIM7Q9C029 511 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 SEMA6BQ9H3T3 888 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTPN3-201ENST00000262539 PCDHB2Q9Y5E7 798 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 COL1A2P08123 1366 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 TADA3O75528 432 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 LRRC41Q15345 812 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 B3GNT9Q6UX72 402 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 TAAR1Q96RJ0 339 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 RPS6KC1Q96S38 1066 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 ASB7Q9H672 318 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 SIK3Q9Y2K2 1263 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 PCDHA13Q9Y5I0 950 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 EMSYQ7Z589 1322 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 SPATA31C1P0DKV0 1188 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 TNNI1P19237 187 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 EMC2Q15006 297 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 EPM2AIP1Q7L775 607 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-201ENST00000262539 GANCQ8TET4 914 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 AP5M1Q9H0R1 490 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 MRFAP1Q9Y605 127 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 GOLGA6CA6NDK9 693 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 GOLGA6BA6NDN3 693 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 SLC15A5A6NIM6 579 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 LRRIQ4A6NIV6 560 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 GOLGA6DP0CG33 693 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 EPHX2P34913 555 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 YARSP54577 528 aaKnown RBP8.84□□□□□ -0.99
PTPN3-201ENST00000262539 ACTR2P61160 394 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 DAAM2Q86T65 1068 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 IRF2BP1Q8IU81 584 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 SLC35F6Q8N357 371 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 MRRFQ96E11 262 aaKnown RBP8.84□□□□□ -0.99
PTPN3-201ENST00000262539 INTS2Q9H0H0 1204 aaKnown RBP8.84□□□□□ -0.99
PTPN3-201ENST00000262539 PRDM16Q9HAZ2 1276 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 DMAC2Q9NW81 257 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 GOLGA6AQ9NYA3 693 aa8.84□□□□□ -0.99
PTPN3-201ENST00000262539 ZNF214Q9UL59 606 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-201ENST00000262539 MYH14Q7Z406 1995 aaKnown RBP8.84□□□□□ -1
PTPN3-201ENST00000262539 PHF20L1A8MW92 1017 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 NOL3O60936 208 aaKnown RBP8.83□□□□□ -1
PTPN3-201ENST00000262539 PIGRP01833 764 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 SETSIPP0DME0 302 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 EPHB4P54760 987 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 FNDC3AQ9Y2H6 1198 aaKnown RBP8.83□□□□□ -1
PTPN3-201ENST00000262539 LY75O60449 1722 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 TTC36A6NLP5 189 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 Q3C1V9 767 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 VPS52Q8N1B4 723 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 MMGT1Q8N4V1 131 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 CLDN3O15551 220 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 EXTL3O43909 919 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 XPAP23025 273 aaPredicted RBP8.83□□□□□ -1
PTPN3-201ENST00000262539 PRKCEQ02156 737 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 MMP19Q99542 508 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 PPCSQ9HAB8 311 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 RGL1Q9NZL6 768 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 MYO1FO00160 1098 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 OGTO15294 1046 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 IVLP07476 585 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 SLC12A3P55017 1021 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 PEX3P56589 373 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 RAD9BQ6WBX8 426 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 RPUSD2Q8IZ73 545 aaKnown RBP8.83□□□□□ -1
PTPN3-201ENST00000262539 RYBPQ8N488 228 aaPredicted RBP8.83□□□□□ -1
PTPN3-201ENST00000262539 SKA2Q8WVK7 121 aaPredicted RBP8.83□□□□□ -1
PTPN3-201ENST00000262539 ANKRD36BP1Q96IX9 119 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 NIFKQ9BYG3 293 aaKnown RBP8.83□□□□□ -1
PTPN3-201ENST00000262539 CYP3A43Q9HB55 503 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 CYP26B1Q9NR63 512 aa8.83□□□□□ -1
PTPN3-201ENST00000262539 HSPBP1Q9NZL4 362 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms