RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NOC2LQ9Y3T9 749 aaKnown RBP30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 M0QZ92 97 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 PDXKO00764 312 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 CYP2J2P51589 502 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 TPD52L1Q16890 204 aaPredicted RBP30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 SPATA1Q5VX52 437 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 RPAINQ86UA6 219 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 ANKFY1Q9P2R3 1169 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 TRAF3IP3Q9Y228 551 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 BICDL2A1A5D9 508 aa30.07■■■□□ 2.4
SMARCD3-201ENST00000262188 LIG4P49917 911 aa30.07■■■□□ 2.4
SMARCD3-201ENST00000262188 PRPF4BQ13523 1007 aaKnown RBP30.07■■■□□ 2.4
SMARCD3-201ENST00000262188 TRAF7Q6Q0C0 670 aa30.07■■■□□ 2.4
SMARCD3-201ENST00000262188 ANKRD33Q7Z3H0 272 aa30.07■■■□□ 2.4
SMARCD3-201ENST00000262188 SRGAP1Q7Z6B7 1085 aa30.07■■■□□ 2.4
SMARCD3-201ENST00000262188 TSG101Q99816 390 aa30.07■■■□□ 2.4
SMARCD3-201ENST00000262188 ACKR2O00590 384 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 TSPAN1O60635 241 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 CAVIN2O95810 425 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 NR3C1P04150 777 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 CT47A1Q5JQC4 288 aaPredicted RBP30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 EEF1DP3Q658K8 133 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 HS2ST1Q7LGA3 356 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 NOC3LQ8WTT2 800 aaKnown RBP30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 EXOC7Q9UPT5 735 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 GHRP10912 638 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 HARSP12081 509 aaKnown RBP30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 ATP1A3P13637 1013 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 NR2F2P24468 414 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 LRRC63Q05C16 580 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 TMEM132AQ24JP5 1023 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 LRRC55Q6ZSA7 311 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 CATSPER4Q7RTX7 472 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 FAM228AQ86W67 206 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 ACO2Q99798 780 aaKnown RBP30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 ARID3AQ99856 593 aa30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 MRPL4Q9BYD3 311 aaKnown RBP30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 AGO3Q9H9G7 860 aaKnown RBP30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 CGNQ9P2M7 1197 aaKnown RBP30.06■■■□□ 2.4
SMARCD3-201ENST00000262188 IKBKBO14920 756 aa30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 CALUO43852 315 aaPredicted RBP30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 ARF4P18085 180 aaPredicted RBP30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 CASP4P49662 377 aa30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 CDC42EP1Q00587 391 aa30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 MBTPS1Q14703 1052 aa30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 ZBTB33Q86T24 672 aa30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 CREBRFQ8IUR6 639 aa30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 KCNN1Q92952 543 aa30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 PRMT7Q9NVM4 692 aaPredicted RBP30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 MROH7Q68CQ1 1323 aa30.05■■■□□ 2.4
SMARCD3-201ENST00000262188 GOLGA8IPA6NC78 632 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 GOLGA8JA6NMD2 632 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 VGLL3A8MV65 326 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 ERLIN2O94905 339 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 UBE2Q1Q7Z7E8 422 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 IRF2BP1Q8IU81 584 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 SAAL1Q96ER3 474 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 PPP1R12CQ9BZL4 782 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 DCDC2CA8MYV0 355 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 ADAM9Q13443 819 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 SEZ6Q53EL9 994 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 ARMCX5Q6P1M9 558 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 SEZ6LQ9BYH1 1024 aa30.04■■■□□ 2.4
SMARCD3-201ENST00000262188 SMTNL1A8MU46 457 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 GOLGA6L19H0YKK7 550 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 TLR3O15455 904 aaKnown RBP30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 ATF7IP2Q5U623 682 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 PIGRP01833 764 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 HOXA11P31270 313 aaPredicted RBP30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 MATR3P43243 847 aaKnown RBP eCLIP30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 LPIN1Q14693 890 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 FAM187BQ17R55 369 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 FBXO47Q5MNV8 452 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 C1orf53Q5VUE5 145 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 RDH13Q8NBN7 331 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 POMGNT1Q8WZA1 660 aa30.03■■■□□ 2.4
SMARCD3-201ENST00000262188 CNTNAP2Q9UHC6 1331 aa30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 CD52P31358 61 aa30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 NFX1Q12986 1120 aaKnown RBP30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 EDRF1Q3B7T1 1238 aa30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 ZBTB41Q5SVQ8 909 aa30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 CEP135Q66GS9 1140 aa30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 PPP4R3CPQ6ZMV5 832 aa30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 ABHD8Q96I13 439 aa30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 NOC4LQ9BVI4 516 aaKnown RBP30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 HSPBP1Q9NZL4 362 aa30.02■■■□□ 2.4
SMARCD3-201ENST00000262188 ABLIM1O14639 778 aa30.01■■■□□ 2.4
SMARCD3-201ENST00000262188 RPS6KA5O75582 802 aa30.01■■■□□ 2.4
SMARCD3-201ENST00000262188 FKBP3Q00688 224 aaKnown RBP30.01■■■□□ 2.4
SMARCD3-201ENST00000262188 FAM26DQ5JW98 314 aa30.01■■■□□ 2.4
SMARCD3-201ENST00000262188 TCHPQ9BT92 498 aa30.01■■■□□ 2.4
SMARCD3-201ENST00000262188 PDZD7Q9H5P4 517 aa30.01■■■□□ 2.4
SMARCD3-201ENST00000262188 OGFRQ9NZT2 677 aa30.01■■■□□ 2.4
SMARCD3-201ENST00000262188 TULP1O00294 542 aaPredicted RBP30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 SFPQP23246 707 aaKnown RBP eCLIP30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 CCL23P55773 120 aa30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 LRRC8DQ7L1W4 858 aa30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 PDCL2Q8N4E4 241 aa30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 SCLYQ96I15 445 aa30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 TOX2Q96NM4 488 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms