RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 HARS2P49590 506 aaKnown RBP14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 TAP1Q03518 808 aa14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 KCNB1Q14721 858 aa14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 TRIM72Q6ZMU5 477 aa14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 RMDN1Q96DB5 314 aa14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 NPTXRO95502 500 aa14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 HSD17B4P51659 736 aa14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 TDRD7Q8NHU6 1098 aaKnown RBP14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 FIS1Q9Y3D6 152 aa14.46□□□□□ -0.09
PDGFRB-201ENST00000261799 CCDC151A5D8V7 595 aa14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 PRPF4O43172 522 aaKnown RBP eCLIP14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 SRGAP2O75044 1071 aa14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 CAP2P40123 477 aa14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 PRKCEQ02156 737 aa14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 ZNF484Q5JVG2 852 aa14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 GPRASP2Q96D09 838 aa14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 MED15Q96RN5 788 aa14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 INTS2Q9H0H0 1204 aaKnown RBP14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 NDFIP2Q9NV92 336 aa14.46□□□□□ -0.1
PDGFRB-201ENST00000261799 FKTNO75072 461 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 HMBSP08397 361 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 THEMIS2Q5TEJ8 643 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 ANGPTL8Q6UXH0 198 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 CDKL3Q8IVW4 592 aaPredicted RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 DESI2Q9BSY9 194 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 HOXC6P09630 235 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 AP1B1Q10567 949 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 ATF7IP2Q5U623 682 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 DEFB128Q7Z7B8 93 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 EMILIN2Q9BXX0 1053 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 DDX56Q9NY93 547 aaKnown RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 ABCA6Q8N139 1617 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 PGRMC1O00264 195 aaKnown RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 HGSO14964 777 aaPredicted RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 SERPINB6P35237 376 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 TCF7P36402 384 aaPredicted RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 PNPLA4P41247 253 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 MNAT1P51948 309 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 INHBEP58166 350 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 RBL2Q08999 1139 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 ACBD5Q5T8D3 534 aaPredicted RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 MTG1Q9BT17 334 aaPredicted RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 VCX3AQ9NNX9 186 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 SARS2Q9NP81 518 aaKnown RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 KLHL14Q9P2G3 628 aa14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 CNOT8Q9UFF9 292 aaKnown RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 DIS3Q9Y2L1 958 aaKnown RBP14.45□□□□□ -0.1
PDGFRB-201ENST00000261799 PQBP1O60828 265 aaKnown RBP14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 RNASEH1O60930 286 aaKnown RBP14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 IGFBP4P22692 258 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 BACE1P56817 501 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 PTPAQ15257 358 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 CCDC157Q569K6 752 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 ASAP3Q8TDY4 903 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 DAAM1Q9Y4D1 1078 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 MYPNQ86TC9 1320 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 TRPA1O75762 1119 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 SCP2P22307 547 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 IL1RL1Q01638 556 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 NAALADL2Q58DX5 795 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 FBXO33Q7Z6M2 555 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 SLITRK1Q96PX8 696 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 LMBRD1Q9NUN5 540 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 ORC6Q9Y5N6 252 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 SNX9Q9Y5X1 595 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 FER1L4A9Z1Z3 1794 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 GNGT2O14610 69 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 MAPRE1Q15691 268 aaKnown RBP14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 IMPG1Q17R60 797 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 FAM102AQ5T9C2 384 aaPredicted RBP14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 FGD4Q96M96 766 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 FOPNLQ96NB1 174 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 MXRA8Q9BRK3 442 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 MYO1DO94832 1006 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 FAM50BQ9Y247 325 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 NDUFAB1O14561 156 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 GAS2O43903 313 aaKnown RBP14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 TDP2O95551 362 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 TPI1P60174 286 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 MB21D2Q8IYB1 491 aaPredicted RBP14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 RDM1Q8NG50 284 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 ZNF512BQ96KM6 892 aaPredicted RBP14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 RNF208Q9H0X6 261 aa14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 THG1LQ9NWX6 298 aaKnown RBP14.44□□□□□ -0.1
PDGFRB-201ENST00000261799 GOLGA8KD6RF30 607 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 MT-ND3P03897 115 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 TCP11X2Q5H9J9 407 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 INTS5Q6P9B9 1019 aaKnown RBP14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 TTC8Q8TAM2 541 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 ULK4Q96C45 1275 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 AFF4Q9UHB7 1163 aaKnown RBP14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 PPP1R12AO14974 1030 aaPredicted RBP14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 ICAM1P05362 532 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 SLFNL1Q499Z3 407 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 HEATR6Q6AI08 1181 aaKnown RBP14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 CENPUQ71F23 418 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 EGFL8Q99944 293 aa14.43□□□□□ -0.1
PDGFRB-201ENST00000261799 KCND2Q9NZV8 630 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms