RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 GOLGA6BA6NDN3 693 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 DYNC1LI2O43237 492 aaPredicted RBP20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 DGAT1O75907 488 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 HOXD8P13378 290 aaPredicted RBP20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 AKR1A1P14550 325 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 GCKP35557 465 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 PAK1Q13153 545 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 TLDC1Q6P9B6 456 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 DDX20Q9UHI6 824 aaKnown RBP20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 FRMPD3Q5JV73 1810 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 GOLGA6L7A0A1B0GV03 622 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 PSMA7O14818 248 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 ELNP15502 786 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 PPP1R2P41236 205 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 STX17P56962 302 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 TRIM32Q13049 653 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 MYCT1Q8N699 235 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 ENOX1Q8TC92 643 aaKnown RBP20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 ATP8B4Q8TF62 1192 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 NELFBQ8WX92 580 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 OLFML3Q9NRN5 406 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 ERAP1Q9NZ08 941 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 CPSF2Q9P2I0 782 aaKnown RBP20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 TSKSQ9UJT2 592 aa20.51■□□□□ 0.87
COL4A3BP-201ENST00000261415 ZNF286BP0CG31 522 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 ADKP55263 362 aaKnown RBP20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 LRRC41Q15345 812 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 CEP57Q86XR8 500 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 NOA1Q8NC60 698 aaKnown RBP20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 RIN2Q8WYP3 895 aaPredicted RBP20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 BEGAINQ9BUH8 593 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 HOMER3Q9NSC5 361 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 RWDD2AQ9UIY3 292 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 A6NJR5 290 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 AGPSO00116 658 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 OPA1O60313 960 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 MYBL2P10244 700 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 TARBP2Q15633 366 aaKnown RBP20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 DGKDQ16760 1214 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 GUF1Q8N442 669 aaKnown RBP20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 DHTKD1Q96HY7 919 aaPredicted RBP20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 RSRC1Q96IZ7 334 aaKnown RBP20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 RPGRIP1Q96KN7 1286 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 GPRC5CQ9NQ84 441 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 PDLIM7Q9NR12 457 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 SEL1LQ9UBV2 794 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 MYO6Q9UM54 1294 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 Q9Y3F1 56 aa20.5■□□□□ 0.87
COL4A3BP-201ENST00000261415 CACNB2Q08289 660 aaPredicted RBP20.49■□□□□ 0.87
COL4A3BP-201ENST00000261415 C16orf70Q9BSU1 422 aa20.49■□□□□ 0.87
COL4A3BP-201ENST00000261415 ACTR5Q9H9F9 607 aaPredicted RBP20.49■□□□□ 0.87
COL4A3BP-201ENST00000261415 XPNPEP1Q9NQW7 623 aa20.49■□□□□ 0.87
COL4A3BP-201ENST00000261415 INTS13Q9NVM9 706 aa20.49■□□□□ 0.87
COL4A3BP-201ENST00000261415 SIP14410 1827 aa20.49■□□□□ 0.87
COL4A3BP-201ENST00000261415 TRIP12Q14669 1992 aaPredicted RBP20.49■□□□□ 0.87
COL4A3BP-201ENST00000261415 AKR1B15C9JRZ8 316 aaPredicted RBP20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 ADCY3O60266 1144 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 CASP5P51878 434 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 POLGP54098 1239 aaPredicted RBP20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 NAA25Q14CX7 972 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 ARHGEF6Q15052 776 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 ODR4Q5SWX8 454 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 FAM102BQ5T8I3 360 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 PARP9Q8IXQ6 854 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 MYOCDQ8IZQ8 938 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 MCPH1Q8NEM0 835 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 RAET1EQ8TD07 263 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 DHX33Q9H6R0 707 aaKnown RBP20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 NFE2L3Q9Y4A8 694 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 TRIM49BA6NDI0 452 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 PES1O00541 588 aaKnown RBP20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 IFFO1Q0D2I5 559 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 EMC2Q15006 297 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 ZC3H12AQ5D1E8 599 aaKnown RBP20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 SLC35F6Q8N357 371 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 FIZ1Q96SL8 496 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 PAIP2Q9BPZ3 127 aaKnown RBP20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 SLC40A1Q9NP59 571 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 LARSQ9P2J5 1176 aaKnown RBP20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 TRPC6Q9Y210 931 aa20.48■□□□□ 0.87
COL4A3BP-201ENST00000261415 SNUPNO95149 360 aaKnown RBP20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 PRKAR2AP13861 404 aaKnown RBP20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 GBP2P32456 591 aaPredicted RBP20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 PMS1P54277 932 aaKnown RBP20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 FAM178BQ8IXR5 827 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 CCDC13Q8IYE1 715 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 SCFD1Q8WVM8 642 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 P2RX5Q93086 422 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 AP5M1Q9H0R1 490 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 CENPHQ9H3R5 247 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 RNPEPQ9H4A4 650 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 PPME1Q9Y570 386 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 ZBTB42B2RXF5 422 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 H3BRB1 525 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 HBP1O60381 514 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 DUSP11O75319 330 aaKnown RBP20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 HMGCRP04035 888 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 PLS3P13797 630 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 CCNE1P24864 410 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms