RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TNFAIP2Q03169 654 aa24.31■■□□□ 1.48
SIX3-201ENST00000260653 SLC9C1Q4G0N8 1177 aa24.31■■□□□ 1.48
SIX3-201ENST00000260653 EFCAB12Q6NXP0 572 aa24.31■■□□□ 1.48
SIX3-201ENST00000260653 RHPN2Q8IUC4 686 aa24.31■■□□□ 1.48
SIX3-201ENST00000260653 LMO3Q8TAP4 145 aa24.31■■□□□ 1.48
SIX3-201ENST00000260653 ZNF668Q96K58 619 aaPredicted RBP24.31■■□□□ 1.48
SIX3-201ENST00000260653 JPH2Q9BR39 696 aaPredicted RBP24.31■■□□□ 1.48
SIX3-201ENST00000260653 STYXL1Q9Y6J8 313 aa24.31■■□□□ 1.48
SIX3-201ENST00000260653 CYP24A1Q07973 514 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 ENOX2Q16206 610 aaKnown RBP24.3■■□□□ 1.48
SIX3-201ENST00000260653 MYRIPQ8NFW9 859 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 MFSD14AQ96MC6 490 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 POP1Q99575 1024 aaKnown RBP24.3■■□□□ 1.48
SIX3-201ENST00000260653 TMEM117Q9H0C3 514 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 ANKFY1Q9P2R3 1169 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 UQCRHLA0A096LP55 91 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 TTLL13PA6NNM8 815 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 LRRIQ3A6PVS8 624 aaPredicted RBP24.3■■□□□ 1.48
SIX3-201ENST00000260653 AKR1B10O60218 316 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 LRRN2O75325 713 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 UQCRHP07919 91 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 MXI1P50539 228 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 JAM2P57087 298 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 MCCD1P59942 119 aaPredicted RBP24.3■■□□□ 1.48
SIX3-201ENST00000260653 MAPK8IP2Q13387 824 aaPredicted RBP24.3■■□□□ 1.48
SIX3-201ENST00000260653 ASIC2Q16515 512 aa24.3■■□□□ 1.48
SIX3-201ENST00000260653 ASTE1Q2TB18 679 aaPredicted RBP24.3■■□□□ 1.48
SIX3-201ENST00000260653 CDCA2Q69YH5 1023 aaPredicted RBP24.3■■□□□ 1.48
SIX3-201ENST00000260653 SSU72P8A0A1W2PR75 194 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 RCCD1A6NED2 376 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 TMEM88BA6NKF7 163 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 H3BRB1 525 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 TNPO2O14787 897 aaKnown RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 N4BP1O75113 896 aaKnown RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 ZNF484Q5JVG2 852 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 LENG1Q96BZ8 264 aaPredicted RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 CCDC113Q9H0I3 377 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 TUT1Q9H6E5 874 aaKnown RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 TOPORSQ9NS56 1045 aaPredicted RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 PNMA6AP0CW24 399 aaPredicted RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 HOXD8P13378 290 aaPredicted RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 CTGFP29279 349 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 TM4SF4P48230 202 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 EFNA5P52803 228 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 KIAA1328Q86T90 577 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 APEX2Q9UBZ4 518 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 GJD2Q9UKL4 321 aa24.29■■□□□ 1.48
SIX3-201ENST00000260653 AGO2Q9UKV8 859 aaKnown RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 ZNF215Q9UL58 517 aaPredicted RBP24.29■■□□□ 1.48
SIX3-201ENST00000260653 KIF5CO60282 957 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 NLRP11P59045 1033 aaKnown RBP24.28■■□□□ 1.48
SIX3-201ENST00000260653 SPA17Q15506 151 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 EPC2Q52LR7 807 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 EHBP1Q8NDI1 1231 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 NLRP4Q96MN2 994 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 MYO6Q9UM54 1294 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 P4HA2O15460 535 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 EXTL3O43909 919 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 MSCO60682 206 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 ZNF865P0CJ78 1059 aaPredicted RBP24.28■■□□□ 1.48
SIX3-201ENST00000260653 KLRC1P26715 233 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 RGS2P41220 211 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 MAP2K1Q02750 393 aaPredicted RBP24.28■■□□□ 1.48
SIX3-201ENST00000260653 GFPT1Q06210 699 aaPredicted RBP24.28■■□□□ 1.48
SIX3-201ENST00000260653 KLHL30Q0D2K2 578 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 CYP4F22Q6NT55 531 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 IRF2BP2Q7Z5L9 587 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 LACRTQ9GZZ8 138 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 DNAJC12Q9UKB3 198 aa24.28■■□□□ 1.48
SIX3-201ENST00000260653 LCA5LO95447 670 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 DLATP10515 647 aaKnown RBP24.27■■□□□ 1.48
SIX3-201ENST00000260653 ACOT2P49753 483 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 CETN1Q12798 172 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 DGKDQ16760 1214 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 OLFML2BQ68BL8 750 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 PHLDB3Q6NSJ2 640 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 TMC2Q8TDI7 906 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 GUCA1BQ9UMX6 200 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 GNEQ9Y223 722 aaKnown RBP24.27■■□□□ 1.48
SIX3-201ENST00000260653 ZNF233A6NK53 670 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 DYNC1LI2O43237 492 aaPredicted RBP24.27■■□□□ 1.48
SIX3-201ENST00000260653 MATR3P43243 847 aaKnown RBP eCLIP24.27■■□□□ 1.48
SIX3-201ENST00000260653 ZBTB8OSQ8IWT0 167 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 SOCS4Q8WXH5 440 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 JAKMIP2Q96AA8 810 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 APBA2Q99767 749 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 IFIH1Q9BYX4 1025 aaKnown RBP24.27■■□□□ 1.48
SIX3-201ENST00000260653 HAUS4Q9H6D7 363 aa24.27■■□□□ 1.48
SIX3-201ENST00000260653 CA12O43570 354 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 ZNF569Q5MCW4 686 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 ZBTB41Q5SVQ8 909 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 CCDC122Q5T0U0 273 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 SLFN12LQ6IEE8 588 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 MSTO1Q9BUK6 570 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 A0A0B4J269 797 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 CASQ1P31415 396 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 VAV2P52735 878 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 CRELD2Q6UXH1 353 aaPredicted RBP24.26■■□□□ 1.47
SIX3-201ENST00000260653 HHIPL1Q96JK4 782 aa24.26■■□□□ 1.47
SIX3-201ENST00000260653 FAM84AQ96KN4 292 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms