RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CLIC2O15247 247 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 TIMP1P01033 207 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 ADSSP30520 456 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 ZNF165P49910 485 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 PAK2Q13177 524 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 ATF7IP2Q5U623 682 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 EEF1DP3Q658K8 133 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 HAPLN2Q9GZV7 340 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 PDZD7Q9H5P4 517 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 PTPRHQ9HD43 1115 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 TNFSF13BQ9Y275 285 aa17.31■□□□□ 0.36
CCDC90B-201ENST00000260054 A0A1B0GUA9 196 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 BICDL2A1A5D9 508 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 TOM1L1O75674 476 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 RAG1P15918 1043 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 PROZP22891 400 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 LRRC63Q05C16 580 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 TMEM132AQ24JP5 1023 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 HS2ST1Q7LGA3 356 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 DUSP9Q99956 384 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 CBWD1Q9BRT8 395 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 NAT10Q9H0A0 1025 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 ANKFY1Q9P2R3 1169 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 PIN4Q9Y237 131 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 STYXL1Q9Y6J8 313 aa17.3■□□□□ 0.36
CCDC90B-201ENST00000260054 CALUO43852 315 aaPredicted RBP17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 EDRF1Q3B7T1 1238 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 GAS2L3Q86XJ1 694 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 IFIH1Q9BYX4 1025 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 TMX1Q9H3N1 280 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 SCN5AQ14524 2016 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 EVI5O60447 810 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 PARNO95453 639 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 NR3C1P04150 777 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 AXLP30530 894 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 SNRPFP62306 86 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 NCBP1Q09161 790 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 ARMCX5Q6P1M9 558 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 NOTUMQ6P988 496 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 FOXR2Q6PJQ5 311 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 GOLGA5Q8TBA6 731 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 ENOX1Q8TC92 643 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 VWCEQ96DN2 955 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 EEF2KMTQ96G04 330 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 TSG101Q99816 390 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 PCIF1Q9H4Z3 704 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 CBX8Q9HC52 389 aa17.29■□□□□ 0.36
CCDC90B-201ENST00000260054 A0A0B4J269 797 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 N4BP3O15049 544 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 CLDN3O15551 220 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 MGEA5O60502 916 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 CAVIN2O95810 425 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 CXCL10P02778 98 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 MCL1Q07820 350 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 IQCB1Q15051 598 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 TCTN1Q2MV58 587 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 ZNF568Q3ZCX4 644 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 PLEKHG4Q58EX7 1191 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 SLFN12LQ6IEE8 588 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 MFSD5Q6N075 450 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 MPZL3Q6UWV2 235 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 DEFB128Q7Z7B8 93 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 ZBTB33Q86T24 672 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 C12orf56Q8IXR9 622 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 AOPEPQ8N6M6 819 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 ZSWIM2Q8NEG5 633 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 DBF4BQ8NFT6 615 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 TCHPQ9BT92 498 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 CDT1Q9H211 546 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 CGNQ9P2M7 1197 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 PRKAG2Q9UGJ0 569 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 TET1Q8NFU7 2136 aa17.28■□□□□ 0.36
CCDC90B-201ENST00000260054 HARSP12081 509 aaKnown RBP17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 CSF2RAP15509 400 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 GARTP22102 1010 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 NR2F2P24468 414 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 MATR3P43243 847 aaKnown RBP eCLIP17.27■□□□□ 0.363e-8■■■□□ 19
CCDC90B-201ENST00000260054 MYL5Q02045 173 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 NCAPHQ15003 741 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 NFIL3Q16649 462 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 UBXN11Q5T124 520 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 SLC27A1Q6PCB7 646 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 ZC3H3Q8IXZ2 948 aaKnown RBP17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 CSGALNACT2Q8N6G5 542 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 TMEM174Q8WUU8 243 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 EIF2AQ9BY44 585 aaKnown RBP17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 CHST12Q9NRB3 414 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 DMAC2Q9NW81 257 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 HSPBP1Q9NZL4 362 aa17.27■□□□□ 0.36
CCDC90B-201ENST00000260054 RFC2P35250 354 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 CYP2J2P51589 502 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 FKBP3Q00688 224 aaKnown RBP17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 ADAM9Q13443 819 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 DSC3Q14574 896 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms