RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CCDC127Q96BQ5 260 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 TUT1Q9H6E5 874 aaKnown RBP20.56■□□□□ 0.88
TRIM47-201ENST00000254816 GTPBP10A4D1E9 387 aaKnown RBP20.55■□□□□ 0.88
TRIM47-201ENST00000254816 TTLL13PA6NNM8 815 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 C22orf31O95567 290 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 RAPGEF1Q13905 1077 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 PPP1R13LQ8WUF5 828 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 POP1Q99575 1024 aaKnown RBP20.55■□□□□ 0.88
TRIM47-201ENST00000254816 FAM213AQ9BRX8 229 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 PRDM10Q9NQV6 1147 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 TFR2Q9UP52 801 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 GOLGA6L9A6NEM1 432 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 LRRN2O75325 713 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 GARTP22102 1010 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 CASQ1P31415 396 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 CHMP4BP1P59074 171 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 ARID5AQ03989 594 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 SFMBT2Q5VUG0 894 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 GPD1LQ8N335 351 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 HHIPL1Q96JK4 782 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 NLRP4Q96MN2 994 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 IRX2Q9BZI1 471 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-201ENST00000254816 ANKFY1Q9P2R3 1169 aa20.55■□□□□ 0.88
TRIM47-201ENST00000254816 MAPK13O15264 365 aa20.54■□□□□ 0.88
TRIM47-201ENST00000254816 GAS2O43903 313 aaKnown RBP20.54■□□□□ 0.88
TRIM47-201ENST00000254816 KLRC1P26715 233 aa20.54■□□□□ 0.88
TRIM47-201ENST00000254816 ABCD1P33897 745 aa20.54■□□□□ 0.88
TRIM47-201ENST00000254816 CDK17Q00537 523 aa20.54■□□□□ 0.88
TRIM47-201ENST00000254816 ZNF484Q5JVG2 852 aa20.54■□□□□ 0.88
TRIM47-201ENST00000254816 EXOC8Q8IYI6 725 aa20.54■□□□□ 0.88
TRIM47-201ENST00000254816 APBA2Q99767 749 aa20.54■□□□□ 0.88
TRIM47-201ENST00000254816 TMEM134Q9H6X4 195 aa20.54■□□□□ 0.88
TRIM47-201ENST00000254816 GNEQ9Y223 722 aaKnown RBP20.54■□□□□ 0.88
TRIM47-201ENST00000254816 EIF4A3P38919 411 aaKnown RBP20.53■□□□□ 0.88
TRIM47-201ENST00000254816 MATR3P43243 847 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRIM47-201ENST00000254816 MXD4Q14582 209 aaPredicted RBP20.53■□□□□ 0.88
TRIM47-201ENST00000254816 ENOX2Q16206 610 aaKnown RBP20.53■□□□□ 0.88
TRIM47-201ENST00000254816 DGKDQ16760 1214 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 FBXL18Q96ME1 805 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 PPP1R16BQ96T49 567 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 CARD6Q9BX69 1037 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 TOPORSQ9NS56 1045 aaPredicted RBP20.53■□□□□ 0.88
TRIM47-201ENST00000254816 TOMM70O94826 608 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 CYLC1P35663 651 aaPredicted RBP20.53■□□□□ 0.88
TRIM47-201ENST00000254816 HGSNATQ68CP4 663 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 IQCEQ6IPM2 695 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 SOCS4Q8WXH5 440 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 CCDC42Q96M95 316 aa20.53■□□□□ 0.88
TRIM47-201ENST00000254816 JPH2Q9BR39 696 aaPredicted RBP20.53■□□□□ 0.88
TRIM47-201ENST00000254816 INTS2Q9H0H0 1204 aaKnown RBP20.53■□□□□ 0.88
TRIM47-201ENST00000254816 LRRIQ3A6PVS8 624 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 PNMA6AP0CW24 399 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 ACOT2P49753 483 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 CYP27A1Q02318 531 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 TLK2Q86UE8 772 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 PARD3BQ8TEW8 1205 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 KCNN1Q92952 543 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 FAM84AQ96KN4 292 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 SPAG5Q96R06 1193 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 CCDC113Q9H0I3 377 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 AGO2Q9UKV8 859 aaKnown RBP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 PIGRP01833 764 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 HARSP12081 509 aaKnown RBP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 HOXD8P13378 290 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 NLRP11P59045 1033 aaKnown RBP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 CYP24A1Q07973 514 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 TDRD12Q587J7 1177 aaKnown RBP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 ZBTB41Q5SVQ8 909 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 CDCA2Q69YH5 1023 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-201ENST00000254816 CCDC170Q8IYT3 715 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 MNS1Q8NEH6 495 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 MFSD14AQ96MC6 490 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 TMEM117Q9H0C3 514 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 GABRQQ9UN88 632 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 STYXL1Q9Y6J8 313 aa20.52■□□□□ 0.88
TRIM47-201ENST00000254816 ZNF263O14978 683 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 MSCO60682 206 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 PSMC4P43686 418 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 MAP2K1Q02750 393 aaPredicted RBP20.51■□□□□ 0.87
TRIM47-201ENST00000254816 SEZ6Q53EL9 994 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 ZBTB8OSQ8IWT0 167 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 LMO3Q8TAP4 145 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 NUCKS1Q9H1E3 243 aaKnown RBP20.51■□□□□ 0.87
TRIM47-201ENST00000254816 DEF6Q9H4E7 631 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 TRIM10Q9UDY6 481 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 EIF3CLB5ME19 914 aaKnown RBP20.51■□□□□ 0.87
TRIM47-201ENST00000254816 EXTL3O43909 919 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 TBC1D8O95759 1140 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 DLATP10515 647 aaKnown RBP20.51■□□□□ 0.87
TRIM47-201ENST00000254816 KIF11P52732 1056 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 WNT7BP56706 349 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 ARHGAP29Q52LW3 1261 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 EHBP1Q8NDI1 1231 aa20.51■□□□□ 0.87
TRIM47-201ENST00000254816 EIF3CQ99613 913 aaKnown RBP20.51■□□□□ 0.87
TRIM47-201ENST00000254816 PRKCBP05771 671 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 ARHGAP25P42331 645 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 MXI1P50539 228 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 EFNA5P52803 228 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 PPFIA1Q13136 1202 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms