RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 EIF3BP55884 814 aaKnown RBP12.85□□□□□ -0.35
USHBP1-201ENST00000252597 SEMA3FQ13275 785 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 CDC42EP5Q6NZY7 148 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 SLC47A2Q86VL8 602 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 ATP8B4Q8TF62 1192 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 CCT6BQ92526 530 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 ACSF2Q96CM8 615 aaPredicted RBP12.85□□□□□ -0.35
USHBP1-201ENST00000252597 STK33Q9BYT3 514 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 SIX2Q9NPC8 291 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 LRP5O75197 1615 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 ANKRD62A6NC57 917 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 SUN1O94901 812 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 ATF7P17544 494 aaPredicted RBP12.85□□□□□ -0.35
USHBP1-201ENST00000252597 PREPLQ4J6C6 727 aaPredicted RBP12.85□□□□□ -0.35
USHBP1-201ENST00000252597 C6orf118Q5T5N4 469 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 ZNF365Q70YC5 407 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 C4orf33Q8N1A6 199 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 TEKT1Q969V4 418 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 HES6Q96HZ4 224 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 TMEM237Q96Q45 408 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 TGS1Q96RS0 853 aaKnown RBP12.85□□□□□ -0.35
USHBP1-201ENST00000252597 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 ANAPC7Q9UJX3 599 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 INTUQ9ULD6 942 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
USHBP1-201ENST00000252597 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 DDTLA6NHG4 134 aaPredicted RBP12.84□□□□□ -0.35
USHBP1-201ENST00000252597 MEIS2O14770 477 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 PCK1P35558 622 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 ALDH5A1P51649 535 aaPredicted RBP12.84□□□□□ -0.35
USHBP1-201ENST00000252597 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
USHBP1-201ENST00000252597 ZNF564Q8TBZ8 553 aaPredicted RBP12.84□□□□□ -0.35
USHBP1-201ENST00000252597 BICD1Q96G01 975 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 PPP1R12CQ9BZL4 782 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 CDC42EP4Q9H3Q1 356 aaKnown RBP12.84□□□□□ -0.35
USHBP1-201ENST00000252597 AGPAT3Q9NRZ7 376 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 TOPORSQ9NS56 1045 aaPredicted RBP12.84□□□□□ -0.35
USHBP1-201ENST00000252597 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 TCP10L2B9ZVM9 353 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 SLC16A4O15374 487 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 NDUFB10O96000 172 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 TMEM253P0C7T8 217 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 RARAP10276 462 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 CHKAP35790 457 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 PEX3P56589 373 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 GPC5P78333 572 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 NAIF1Q69YI7 327 aaPredicted RBP12.84□□□□□ -0.35
USHBP1-201ENST00000252597 CERS5Q8N5B7 392 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
USHBP1-201ENST00000252597 VPS37BQ9H9H4 285 aa12.84□□□□□ -0.35
USHBP1-201ENST00000252597 HIP1RO75146 1068 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 GJB6O95452 261 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 MYCLP12524 364 aaPredicted RBP12.83□□□□□ -0.35
USHBP1-201ENST00000252597 ECE1P42892 770 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 ZNF131P52739 623 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 DNAJC3Q13217 504 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 FAM102BQ5T8I3 360 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 CPA5Q8WXQ8 436 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 SPOCK2Q92563 424 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.35
USHBP1-201ENST00000252597 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.35
USHBP1-201ENST00000252597 GOLGA8RI6L899 631 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 DDX3YO15523 660 aaKnown RBP12.83□□□□□ -0.36
USHBP1-201ENST00000252597 PHF2O75151 1096 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 SOX10P56693 466 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 ADCY2Q08462 1091 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 ABCB5Q2M3G0 1257 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 DUPD1Q68J44 220 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 STXBP4Q6ZWJ1 553 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 MIGA2Q7L4E1 593 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 YTHDF3Q7Z739 585 aaKnown RBP12.83□□□□□ -0.36
USHBP1-201ENST00000252597 KLF6Q99612 283 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-201ENST00000252597 CHST7Q9NS84 486 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.83□□□□□ -0.36
USHBP1-201ENST00000252597 PPP1R1BQ9UD71 204 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-201ENST00000252597 DCTN4Q9UJW0 460 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 TRAF3IP3Q9Y228 551 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 BCORQ6W2J9 1755 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 RIPK2O43353 540 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 MXI1P50539 228 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 PDE6CP51160 858 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 ATP11AP98196 1134 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 EXOC3L1Q86VI1 746 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 TBC1D22AQ8WUA7 517 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 PITPNM3Q9BZ71 974 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 CARD9Q9H257 536 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 ANAPC5Q9UJX4 755 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 TIAM2Q8IVF5 1701 aa12.83□□□□□ -0.36
USHBP1-201ENST00000252597 CACNA1SQ13698 1873 aa12.82□□□□□ -0.36
USHBP1-201ENST00000252597 KRT16P08779 473 aa12.82□□□□□ -0.36
USHBP1-201ENST00000252597 CD58P19256 250 aa12.82□□□□□ -0.36
USHBP1-201ENST00000252597 TARSP26639 723 aaKnown RBP12.82□□□□□ -0.36
USHBP1-201ENST00000252597 MAPK4P31152 587 aa12.82□□□□□ -0.36
USHBP1-201ENST00000252597 PPP3CAQ08209 521 aa12.82□□□□□ -0.36
USHBP1-201ENST00000252597 AUHQ13825 339 aaKnown RBP12.82□□□□□ -0.36
USHBP1-201ENST00000252597 COBLL1Q53SF7 1204 aa12.82□□□□□ -0.36
USHBP1-201ENST00000252597 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
USHBP1-201ENST00000252597 ERICH1Q86X53 443 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms