RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 CARD9Q9H257 536 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 ASTN2O75129 1339 aaPredicted RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 ANKRD62A6NC57 917 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 H0YIN7 160 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 KIAA0391O15091 583 aaKnown RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 C21orf2O43822 256 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 FTLP02792 175 aaPredicted RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 ADCY1Q08828 1119 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 SIX1Q15475 284 aaPredicted RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 C6orf89Q6UWU4 347 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 HS2ST1Q7LGA3 356 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 CTNNBL1Q8WYA6 563 aaPredicted RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 RNF25Q96BH1 459 aaPredicted RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 ADAM7Q9H2U9 754 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 ARHGEF10LQ9HCE6 1279 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 KCND2Q9NZV8 630 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 PARP14Q460N5 1801 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 GOLGA8IPA6NC78 632 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 GOLGA8JA6NMD2 632 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 PLSCR1O15162 318 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 SKAP2O75563 359 aaPredicted RBP10.91□□□□□ -0.66
COPB1-201ENST00000249923 SOX10P56693 466 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 SF3B2Q13435 895 aaKnown RBP10.91□□□□□ -0.66
COPB1-201ENST00000249923 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
COPB1-201ENST00000249923 FBXO25Q8TCJ0 367 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 TMEM174Q8WUU8 243 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 TEKT3Q9BXF9 490 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 MTFR1LQ9H019 292 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 TOPORSQ9NS56 1045 aaPredicted RBP10.91□□□□□ -0.66
COPB1-201ENST00000249923 ATP8A1Q9Y2Q0 1164 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 RGPD3A6NKT7 1758 aaPredicted RBP10.91□□□□□ -0.66
COPB1-201ENST00000249923 RGPD4Q7Z3J3 1758 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 PPIP5K2O43314 1243 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 CCNE2O96020 404 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 MYZAPP0CAP1 466 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 VAMP7P51809 220 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 HADHBP55084 474 aaKnown RBP10.91□□□□□ -0.66
COPB1-201ENST00000249923 SLC39A4Q6P5W5 647 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 JAMLQ86YT9 394 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 CBWD2Q8IUF1 395 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 MDM1Q8TC05 714 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 FAM151AQ8WW52 585 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 N4BP2L2Q92802 583 aaPredicted RBP10.91□□□□□ -0.66
COPB1-201ENST00000249923 WNK4Q96J92 1243 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 AGO4Q9HCK5 861 aaKnown RBP10.91□□□□□ -0.66
COPB1-201ENST00000249923 HSPBP1Q9NZL4 362 aa10.91□□□□□ -0.66
COPB1-201ENST00000249923 TNS1Q9HBL0 1735 aaKnown RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 ARHGEF35A5YM69 484 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 GRIN3BO60391 1043 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 CAND2O75155 1236 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 APBA3O96018 575 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 PYGMP11217 842 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 MUTP22033 750 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 IFNAR2P48551 515 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 CLNS1AP54105 237 aaKnown RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 DR1Q01658 176 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 PLA2G4FQ68DD2 849 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 LMBR1Q8WVP7 490 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 TLCD1Q96CP7 247 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 RIT2Q99578 217 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 NCAPGQ9BPX3 1015 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 ERP44Q9BS26 406 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 HERPUD2Q9BSE4 406 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 CXorf56Q9H5V9 222 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 NOVA2Q9UNW9 492 aaKnown RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.9□□□□□ -0.66
COPB1-201ENST00000249923 PFASO15067 1338 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 TRAPPC3O43617 180 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 FAM107AO95990 144 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 MMEP08473 750 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 CLTAP09496 248 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 RPL21P46778 160 aaKnown RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 MCCD1P59942 119 aaPredicted RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 MAGOHP61326 146 aaKnown RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 FMO1Q01740 532 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 TKFCQ3LXA3 575 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 SYCP3Q8IZU3 236 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 MGARPQ8TDB4 240 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 DYDC1Q8WWB3 177 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 BSNDQ8WZ55 320 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 MAGOHBQ96A72 148 aaKnown RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 TNFAIP3P21580 790 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 COMTP21964 271 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 GTF2BQ00403 316 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 RSBN1LQ6PCB5 846 aaPredicted RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 CCDC25Q86WR0 208 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 FAM71AQ8IYT1 594 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 TCP11Q8WWU5 503 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 DHX38Q92620 1227 aaKnown RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 LBHD1Q9BQE6 289 aaPredicted RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 ZSWIM1Q9BR11 485 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 TRIM7Q9C029 511 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 SNX24Q9Y343 169 aa10.9□□□□□ -0.66
COPB1-201ENST00000249923 MRPL11Q9Y3B7 192 aaKnown RBP10.9□□□□□ -0.66
COPB1-201ENST00000249923 ARID2Q68CP9 1835 aa10.9□□□□□ -0.67
COPB1-201ENST00000249923 ADGRA3Q8IWK6 1321 aa10.9□□□□□ -0.67
COPB1-201ENST00000249923 ATXN2Q99700 1313 aaKnown RBP10.9□□□□□ -0.67
COPB1-201ENST00000249923 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms