RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 EPB41L5Q9HCM4 733 aa23.45■■□□□ 1.34
CLN6-201ENST00000249806 TMEM59LQ9UK28 342 aa23.45■■□□□ 1.34
CLN6-201ENST00000249806 STAM2O75886 525 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 HEXIM1O94992 359 aaKnown RBP23.44■■□□□ 1.34
CLN6-201ENST00000249806 ATP4AP20648 1035 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 AARSP49588 968 aaKnown RBP eCLIP23.44■■□□□ 1.341e-7■■■■■ 41.2
CLN6-201ENST00000249806 STXBP2Q15833 593 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 SEPT14Q6ZU15 432 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 SYCE1Q8N0S2 351 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 FAM71BQ8TC56 605 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 KREMEN1Q96MU8 473 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 SUCLA2Q9P2R7 463 aaPredicted RBP23.44■■□□□ 1.34
CLN6-201ENST00000249806 USP20Q9Y2K6 914 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 NCANO14594 1321 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 ERICH4A6NGS2 130 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 HNRNPDLO14979 420 aaKnown RBP23.44■■□□□ 1.34
CLN6-201ENST00000249806 SGPL1O95470 568 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 CARSP49589 748 aaKnown RBP23.44■■□□□ 1.34
CLN6-201ENST00000249806 GUCY2DQ02846 1103 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 MIS18BP1Q6P0N0 1132 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 TAS1R3Q7RTX0 852 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 RPUSD2Q8IZ73 545 aaKnown RBP23.44■■□□□ 1.34
CLN6-201ENST00000249806 MCPH1Q8NEM0 835 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 ACTRT1Q8TDG2 376 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 AP1M1Q9BXS5 423 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 MED4Q9NPJ6 270 aa23.44■■□□□ 1.34
CLN6-201ENST00000249806 WDR90Q96KV7 1748 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 AGPSO00116 658 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 PMM2O15305 246 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 DDNO94850 711 aaPredicted RBP23.43■■□□□ 1.34
CLN6-201ENST00000249806 SUPT20HL2P0C7V6 817 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 GGCXP38435 758 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 PPATQ06203 517 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 TRADDQ15628 312 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 KRT39Q6A163 491 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 HES6Q96HZ4 224 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 FAM84AQ96KN4 292 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 FBXL18Q96ME1 805 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 POLR3FQ9H1D9 316 aaPredicted RBP23.43■■□□□ 1.34
CLN6-201ENST00000249806 ATP6V0A4Q9HBG4 840 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 GDF3Q9NR23 364 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 BTBD7Q9P203 1132 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 COG5Q9UP83 839 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 MYPNQ86TC9 1320 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 ANKRD62A6NC57 917 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 MCCD1P59942 119 aaPredicted RBP23.43■■□□□ 1.34
CLN6-201ENST00000249806 SCFD2Q8WU76 684 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 IFT81Q8WYA0 676 aa23.43■■□□□ 1.34
CLN6-201ENST00000249806 RAD51CO43502 376 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 FTLP02792 175 aaPredicted RBP23.42■■□□□ 1.34
CLN6-201ENST00000249806 DLATP10515 647 aaKnown RBP23.42■■□□□ 1.34
CLN6-201ENST00000249806 EPHB4P54760 987 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 XKR3Q5GH77 459 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 TAF3Q5VWG9 929 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 IFT20Q8IY31 132 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 TAS1R2Q8TE23 839 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 BICD1Q96G01 975 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 MFSD14AQ96MC6 490 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 AMFRQ9UKV5 643 aa23.42■■□□□ 1.34
CLN6-201ENST00000249806 CYP26A1O43174 497 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 KCTD19Q17RG1 926 aaPredicted RBP23.41■■□□□ 1.34
CLN6-201ENST00000249806 LBX2Q6XYB7 198 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 SLC47A2Q86VL8 602 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 FAM71AQ8IYT1 594 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 PROCA1Q8NCQ7 364 aaPredicted RBP23.41■■□□□ 1.34
CLN6-201ENST00000249806 CHST13Q8NET6 341 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 TMEM143Q96AN5 459 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 PCDHB18PQ96TA0 734 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 TMEM8AQ9HCN3 771 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 NFU1Q9UMS0 254 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 NOC2LQ9Y3T9 749 aaKnown RBP23.41■■□□□ 1.34
CLN6-201ENST00000249806 TNFRSF8P28908 595 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 CYP24A1Q07973 514 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 NOP9Q86U38 636 aaKnown RBP23.41■■□□□ 1.34
CLN6-201ENST00000249806 DNERQ8NFT8 737 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 EPS8L1Q8TE68 723 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 IFT74Q96LB3 600 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.41■■□□□ 1.34
CLN6-201ENST00000249806 FAM213AQ9BRX8 229 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 CHORDC1Q9UHD1 332 aaPredicted RBP23.41■■□□□ 1.34
CLN6-201ENST00000249806 COQ4Q9Y3A0 265 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 SYNGAP1Q96PV0 1343 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 PTPRFP10586 1907 aa23.41■■□□□ 1.34
CLN6-201ENST00000249806 RNF40O75150 1001 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 CHRNB2P17787 502 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 POLGP54098 1239 aaPredicted RBP23.4■■□□□ 1.34
CLN6-201ENST00000249806 RTP1P59025 263 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 TNNC1P63316 161 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 PRPF4BQ13523 1007 aaKnown RBP23.4■■□□□ 1.34
CLN6-201ENST00000249806 BRDTQ58F21 947 aaPredicted RBP23.4■■□□□ 1.34
CLN6-201ENST00000249806 SV2AQ7L0J3 742 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 VTI1AQ96AJ9 217 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 ZNF302Q9NR11 478 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 ARHGAP28Q9P2N2 729 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 MAFBQ9Y5Q3 323 aaPredicted RBP23.4■■□□□ 1.34
CLN6-201ENST00000249806 ADM5C9JUS6 153 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 PGRMC1O00264 195 aaKnown RBP23.4■■□□□ 1.34
CLN6-201ENST00000249806 EMC2Q15006 297 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 EMBQ6PCB8 327 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 GPD1LQ8N335 351 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms