RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 LIG4P49917 911 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 CDK7P50613 346 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 NLRP11P59045 1033 aaKnown RBP14.15□□□□□ -0.14
LSM8-201ENST00000249299 CHMP4BP1P59074 171 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 FANCCQ00597 558 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 MBTD1Q05BQ5 628 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 RBL2Q08999 1139 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 KCNJ12Q14500 433 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 HIC1Q14526 733 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 FILIP1LQ4L180 1135 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 TSHZ1Q6ZSZ6 1077 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 APBB1IPQ7Z5R6 666 aaPredicted RBP14.15□□□□□ -0.14
LSM8-201ENST00000249299 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.15□□□□□ -0.14
LSM8-201ENST00000249299 XXYLT1Q8NBI6 393 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 U2AF1L4Q8WU68 220 aaKnown RBP14.15□□□□□ -0.14
LSM8-201ENST00000249299 DNAJB3Q8WWF6 145 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 NLRP7Q8WX94 980 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 MRFAP1L1Q96HT8 127 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 FBXL18Q96ME1 805 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 KIFC3Q9BVG8 833 aa14.15□□□□□ -0.14
LSM8-201ENST00000249299 A0A087WZ62 844 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 SERPINC1P01008 464 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 VTNP04004 478 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 EPB41P11171 864 aaKnown RBP14.15□□□□□ -0.15
LSM8-201ENST00000249299 DARSP14868 501 aaKnown RBP14.15□□□□□ -0.15
LSM8-201ENST00000249299 EIF4BP23588 611 aaKnown RBP14.15□□□□□ -0.15
LSM8-201ENST00000249299 CDC25BP30305 580 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 PTGISQ16647 500 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 FAM47CQ5HY64 1035 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 FAM26DQ5JW98 314 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 ARMCX5Q6P1M9 558 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 RUFY4Q6ZNE9 571 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 USP37Q86T82 979 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 KSR1Q8IVT5 923 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 USP38Q8NB14 1042 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 BICD1Q96G01 975 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 ACO2Q99798 780 aaKnown RBP14.15□□□□□ -0.15
LSM8-201ENST00000249299 FDXACB1Q9BRP7 624 aaPredicted RBP14.15□□□□□ -0.15
LSM8-201ENST00000249299 TNFSF13BQ9Y275 285 aa14.15□□□□□ -0.15
LSM8-201ENST00000249299 CNTNAP2Q9UHC6 1331 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 A0A0B4J269 797 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 A0A1B0GTH6 734 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 INO80B-WBP1J3KQ70 363 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 CLDN3O15551 220 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 ATP1A3P13637 1013 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 PROZP22891 400 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 SFPQP23246 707 aaKnown RBP eCLIP14.14□□□□□ -0.15
LSM8-201ENST00000249299 ADSSP30520 456 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 UBASH3AP57075 661 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 MRPS6P82932 125 aaKnown RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 ZNF200P98182 395 aaPredicted RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 MCL1Q07820 350 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 PRPF4BQ13523 1007 aaKnown RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 KRT31Q15323 416 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 AMHR2Q16671 573 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 INTS8Q75QN2 995 aaKnown RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 APTXQ7Z2E3 356 aaKnown RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 TRIM59Q8IWR1 403 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 CCDC51Q96ER9 411 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 BORCS6Q96GS4 357 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 CNOT6LQ96LI5 555 aaKnown RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 SCLT1Q96NL6 688 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 TOX2Q96NM4 488 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 TUBGCP2Q9BSJ2 902 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 CELF4Q9BZC1 486 aaKnown RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 TRIM5Q9C035 493 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 FAM49AQ9H0Q0 323 aaPredicted RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 PTPRHQ9HD43 1115 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 HSPBP1Q9NZL4 362 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 ARMCX3Q9UH62 379 aaPredicted RBP14.14□□□□□ -0.15
LSM8-201ENST00000249299 NOD1Q9Y239 953 aa14.14□□□□□ -0.15
LSM8-201ENST00000249299 EXTL3O43909 919 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 EXOC3O60645 756 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 AKAP3O75969 853 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 TFRCP02786 760 aaKnown RBP14.13□□□□□ -0.15
LSM8-201ENST00000249299 PLCB2Q00722 1185 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 SNX17Q15036 470 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 MAN2A1Q16706 1144 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 KIZQ2M2Z5 673 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 ATF7IP2Q5U623 682 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 SLC39A4Q6P5W5 647 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 ANKRD33Q7Z3H0 272 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 CCDC155Q8N6L0 562 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 POMGNT1Q8WZA1 660 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 ZBTB10Q96DT7 871 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 TARS2Q9BW92 718 aaKnown RBP14.13□□□□□ -0.15
LSM8-201ENST00000249299 TRPV2Q9Y5S1 764 aa14.13□□□□□ -0.15
LSM8-201ENST00000249299 A0A1B0GUA9 196 aa14.12□□□□□ -0.15
LSM8-201ENST00000249299 LGALS16A8MUM7 142 aa14.12□□□□□ -0.15
LSM8-201ENST00000249299 ANKRD63C9JTQ0 380 aa14.12□□□□□ -0.15
LSM8-201ENST00000249299 N4BP3O15049 544 aa14.12□□□□□ -0.15
LSM8-201ENST00000249299 CLIC2O15247 247 aa14.12□□□□□ -0.15
LSM8-201ENST00000249299 ERLIN2O94905 339 aa14.12□□□□□ -0.15
LSM8-201ENST00000249299 PARNO95453 639 aaKnown RBP14.12□□□□□ -0.15
LSM8-201ENST00000249299 COL6A1P12109 1028 aa14.12□□□□□ -0.15
LSM8-201ENST00000249299 MTIF2P46199 727 aaKnown RBP14.12□□□□□ -0.15
LSM8-201ENST00000249299 ZNF75DP51815 510 aa14.12□□□□□ -0.15
LSM8-201ENST00000249299 COPB1P53618 953 aaKnown RBP14.12□□□□□ -0.15
LSM8-201ENST00000249299 NR1I3Q14994 352 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms